Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 AL135905.2-201ENST00000584934 1404 ntBASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 AC092053.2-201ENST00000640557 1818 ntBASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CCDC163A0A0D9SF12 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC163A0A0D9SF12 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC163A0A0D9SF12 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 MTDHP1-201ENST00000605323 784 ntBASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC163A0A0D9SF12 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC163A0A0D9SF12 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 AL049637.2-201ENST00000641778 930 ntBASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC163A0A0D9SF12 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 C2orf69P4-201ENST00000565394 541 ntBASIC20.67■□□□□ 0.9
CCDC163A0A0D9SF12 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms