Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Gm16437-201ENSMUST00000025669 507 ntBASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Scarna2-201ENSMUST00000157560 414 ntBASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.67□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Gm8969-201ENSMUST00000199694 526 ntBASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tcrg-V4A0A0B4J1J8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms