Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC187A0A096LP49 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 C11orf96-202ENST00000528572 1834 ntBASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC187A0A096LP49 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
CCDC187A0A096LP49 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC187A0A096LP49 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC187A0A096LP49 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 SOX15-203ENST00000570788 1093 ntBASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 RN7SL471P-201ENST00000580476 299 ntBASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC187A0A096LP49 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC187A0A096LP49 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC187A0A096LP49 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC187A0A096LP49 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms