Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SPRY4-IT1_1.1-201ENST00000611334 91 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 ABCC8-220ENST00000612903 183 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 CU633906.4-201ENST00000624484 1023 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ZNF675-209ENST00000601935 1444 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ZSCAN5C-201ENST00000376267 1491 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ADGRV1-237ENST00000640815 1522 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ACOT9-204ENST00000379303 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AC244636.2-201ENST00000448031 1669 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 RBPJ-208ENST00000504907 1682 ntTSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 BTN2A3P-201ENST00000377662 1836 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SNX18Q96RF0 AL390728.1-201ENST00000397642 1941 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC9.19□□□□□ -0.94
SNX18Q96RF0 DDX50P2-201ENST00000463545 2193 ntBASIC9.19□□□□□ -0.94
SNX18Q96RF0 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 PKD1L3-201ENST00000620267 5199 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 MEIS2-205ENST00000397624 2748 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 LINC02078-201ENST00000592718 4237 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 SLCO2B1-201ENST00000289575 4494 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 GOLT1A-201ENST00000308302 883 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 RN7SKP243-201ENST00000363105 309 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 DEDD-201ENST00000368005 1256 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 OBP2B-202ENST00000372034 691 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 ZNF816-204ENST00000391786 562 ntTSL 4 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 NDUFB5P2-201ENST00000398690 566 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 ELOB-203ENST00000409906 991 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 RN7SKP143-201ENST00000410519 310 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 PRKX-AS1-201ENST00000414074 516 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AL512844.1-201ENST00000415279 1779 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 ELOBP3-201ENST00000416023 294 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 HMGA1P6-201ENST00000418454 391 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 CD24P1-201ENST00000422383 225 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 FMO11P-201ENST00000424742 1370 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 RPL10P3-201ENST00000431607 468 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 AL596330.1-201ENST00000431691 837 ntTSL 3 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 TNS3-206ENST00000442536 1166 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC010904.1-201ENST00000443549 315 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC093326.1-201ENST00000444079 762 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 LINC02245-201ENST00000449259 2928 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AL596087.2-201ENST00000451784 484 ntTSL 3 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 MEIS1-AS2-202ENST00000454595 586 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 LINC00635-202ENST00000464359 2119 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 HNRNPA1P23-201ENST00000491091 1133 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 RPSAP52-202ENST00000493929 878 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 TSEN2P1-201ENST00000513552 1387 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 LINC01485-203ENST00000522571 557 ntTSL 4 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC091114.1-201ENST00000522815 630 ntTSL 3 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 PABPC1P4-201ENST00000539977 1875 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 CBFA2T2-210ENST00000543126 3502 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AL136295.2-201ENST00000558478 747 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 MAP2K1-203ENST00000566326 1432 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC006441.2-201ENST00000580084 302 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 ZNF582-AS1-202ENST00000587979 1606 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 TTN-AS1-236ENST00000590040 855 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC024075.1-201ENST00000596816 546 ntTSL 4 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 Metazoa_SRP.25-201ENST00000600454 283 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC005702.5-201ENST00000618000 421 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC025048.5-201ENST00000618795 421 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 GPSM3-210ENST00000619085 1177 ntTSL 5 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC233724.15-201ENST00000621430 236 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 MND1-206ENST00000622785 830 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC022784.8-201ENST00000623764 559 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 AC092128.1-201ENST00000641751 886 ntBASIC9.18□□□□□ -0.94
SNX18Q96RF0 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 DIAPH3-203ENST00000400319 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SNX18Q96RF0 BPI-204ENST00000451435 2857 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 AL121895.1-202ENST00000441208 2701 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC9.18□□□□□ -0.94
SNX18Q96RF0 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MAPK10-386ENST00000642038 2354 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MAPK10-295ENST00000641274 2259 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 GPR89A-201ENST00000313835 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC109347.1-201ENST00000562919 2036 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 TNFSF10-201ENST00000241261 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC005304.2-201ENST00000580134 1982 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 DCAF13-208ENST00000612750 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms