Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 ENTHD1-201ENST00000325157 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 TMEM207-201ENST00000354905 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 SYT16-201ENST00000430451 2029 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 WISP1-202ENST00000250160 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 AC099335.1-201ENST00000430498 1335 ntBASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
NPIPA3F8WFD2 CCR9-202ENST00000357632 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 TDRD3-208ENST00000535286 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 LINC01055-201ENST00000435067 1721 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ZNF574-204ENST00000600245 3598 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 POTEG-202ENST00000547848 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 DERL2-201ENST00000158771 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 GSK3B-202ENST00000316626 1636 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 TPTE-202ENST00000612746 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 CACNB2-216ENST00000617363 4385 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 SLC25A21-201ENST00000331299 2785 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 PLEKHA8P1-202ENST00000336399 1524 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ATP2B3-205ENST00000393842 4064 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 FGGY-202ENST00000371210 1041 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 C20orf173-202ENST00000374345 985 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 NOL6-204ENST00000379471 3843 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 MED18-202ENST00000398997 1106 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 LINC01231-201ENST00000452746 886 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 BX072579.2-201ENST00000455857 525 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 BX322234.2-201ENST00000457833 654 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 LINC01341-204ENST00000505748 595 ntTSL 4 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 FLJ42102-203ENST00000508543 460 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC083841.2-201ENST00000510610 602 ntTSL 4 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC112240.1-201ENST00000511007 394 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 LINC01021-205ENST00000514255 545 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 LINC01863-201ENST00000523242 494 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC067930.4-201ENST00000530600 498 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC007552.1-201ENST00000540992 927 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 NDUFA12-204ENST00000547157 276 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC099511.1-202ENST00000563923 491 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 RN7SL712P-201ENST00000579354 308 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 MIR5003-201ENST00000581891 99 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 RN7SL819P-201ENST00000581896 270 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ZIM2-202ENST00000593931 483 ntTSL 3 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC106788.2-201ENST00000610646 107 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AL138689.1-201ENST00000614612 668 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC092375.3-201ENST00000622730 106 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 BCL6B-201ENST00000293805 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AP005205.3-201ENST00000623844 1929 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ZSCAN12P1-202ENST00000529104 1657 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC023300.3-201ENST00000623096 5025 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 PPP4R1L-207ENST00000493688 2325 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ADGRG2-204ENST00000357544 4678 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 CAMKK1-203ENST00000381769 3508 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ZNF23-205ENST00000497160 2799 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 AC037441.1-202ENST00000511897 3879 ntTSL 2 BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 CASP1-202ENST00000436863 1477 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 ZIK1P1-201ENST00000456074 1459 ntBASIC9.28□□□□□ -0.92
NPIPA3F8WFD2 KCNMA1-228ENST00000638223 4340 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
NPIPA3F8WFD2 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
NPIPA3F8WFD2 EXOC6-202ENST00000371543 2714 ntTSL 2 BASIC9.27□□□□□ -0.92
NPIPA3F8WFD2 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
NPIPA3F8WFD2 GC-204ENST00000504199 1777 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
NPIPA3F8WFD2 CAMK2G-203ENST00000322680 3818 ntTSL 5 BASIC9.27□□□□□ -0.92
NPIPA3F8WFD2 AC004893.1-201ENST00000442161 1393 ntBASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 SLC13A5-201ENST00000293800 3176 ntTSL 2 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 HCAR2-201ENST00000328880 2051 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 MED24-202ENST00000394126 3896 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 CKMT2-AS1-201ENST00000500148 2224 ntTSL 2 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 BFAR-207ENST00000563971 1662 ntTSL 5 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 RBP7-201ENST00000294435 636 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 AC106795.2-203ENST00000366189 511 ntTSL 5 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 C10orf53-201ENST00000374111 799 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 NPSR1-203ENST00000381539 1233 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 IGLC2-201ENST00000390323 462 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 IGLC3-201ENST00000390325 462 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 ATP5G1-202ENST00000393366 614 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 AL031667.2-201ENST00000423903 323 ntBASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 AC114402.1-201ENST00000427282 328 ntBASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 PLA2G6-211ENST00000436218 552 ntTSL 4 BASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 GAPDHP74-201ENST00000449411 625 ntBASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 RN7SL334P-201ENST00000465067 279 ntBASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 RPL3P6-201ENST00000474162 1204 ntBASIC9.27□□□□□ -0.93
NPIPA3F8WFD2 AP004607.8-201ENST00000526848 323 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms