Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CYP46A1Q9Y6A2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
CYP46A1Q9Y6A2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
CYP46A1Q9Y6A2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.7■■□□□ 1.55
CYP46A1Q9Y6A2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CYP46A1Q9Y6A2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 POU5F1P4-201ENST00000413175 1085 ntBASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 AC123595.1-201ENST00000440769 1046 ntBASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.69■■□□□ 1.54
CYP46A1Q9Y6A2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 AC138907.5-202ENST00000569484 235 ntBASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.68■■□□□ 1.54
CYP46A1Q9Y6A2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CYP46A1Q9Y6A2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 YBX1P1-201ENST00000445822 960 ntBASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CYP46A1Q9Y6A2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 TERF1P2-201ENST00000583350 1212 ntBASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CYP46A1Q9Y6A2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 FEM1AP1-201ENST00000431297 1995 ntBASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 ZNRF2P3-201ENST00000424200 374 ntBASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.64■■□□□ 1.54
CYP46A1Q9Y6A2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.64■■□□□ 1.53
CYP46A1Q9Y6A2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.64■■□□□ 1.53
CYP46A1Q9Y6A2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CYP46A1Q9Y6A2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms