Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 AC233263.1-201ENST00000578059 224 ntBASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 AC026471.6-201ENST00000622954 1905 ntBASIC21.93■■□□□ 1.1
HCFC2Q9Y5Z7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 Z99916.2-201ENST00000604037 246 ntBASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HCFC2Q9Y5Z7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 C9orf163-202ENST00000624034 2573 ntBASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 SOX15-203ENST00000570788 1093 ntBASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 AC069544.1-201ENST00000609399 999 ntBASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HCFC2Q9Y5Z7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HCFC2Q9Y5Z7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HCFC2Q9Y5Z7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HCFC2Q9Y5Z7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
HCFC2Q9Y5Z7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 AC007322.3-201ENST00000426526 701 ntBASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 AC073912.3-201ENST00000624414 853 ntBASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.89■■□□□ 1.09
HCFC2Q9Y5Z7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.88■■□□□ 1.09
HCFC2Q9Y5Z7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms