Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB3Q9Y5E6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHB3Q9Y5E6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB3Q9Y5E6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 AC104771.1-201ENST00000603335 964 ntBASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 AF106564.1-201ENST00000607058 2553 ntBASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB3Q9Y5E6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PCDHB3Q9Y5E6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHB3Q9Y5E6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PCDHB3Q9Y5E6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PCDHB3Q9Y5E6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB3Q9Y5E6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB3Q9Y5E6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHB3Q9Y5E6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PCDHB3Q9Y5E6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 AL355802.2-201ENST00000402069 882 ntBASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHB3Q9Y5E6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 CROCCP5-201ENST00000436658 830 ntBASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDHB3Q9Y5E6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms