Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 AP005212.1-201ENST00000581547 1997 ntBASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 AC121338.2-201ENST00000622535 1744 ntBASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 AC009237.3-201ENST00000393279 1427 ntBASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 AC126544.1-201ENST00000580842 1059 ntBASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 AC073314.1-201ENST00000568729 2216 ntBASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MRPS28Q9Y2Q9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 AL136116.3-201ENST00000402907 1138 ntBASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 AC233992.3-201ENST00000607491 485 ntBASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MRPS28Q9Y2Q9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
MRPS28Q9Y2Q9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
MRPS28Q9Y2Q9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MRPS28Q9Y2Q9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 IGHV3-19-201ENST00000521488 291 ntBASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MRPS28Q9Y2Q9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 UNC93B3-201ENST00000308076 687 ntBASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 AC055733.4-201ENST00000638462 1354 ntBASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MRPS28Q9Y2Q9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MRPS28Q9Y2Q9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms