Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 AC091799.1-201ENST00000422823 811 ntBASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 AC007322.3-201ENST00000426526 701 ntBASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN8AQ9UQD0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 AC245052.3-201ENST00000450182 901 ntBASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 SLC7A5P1-201ENST00000568957 537 ntBASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN8AQ9UQD0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 AC006970.2-201ENST00000450065 779 ntBASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 AL109923.1-201ENST00000618799 583 ntBASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.73■□□□□ 0.91
SCN8AQ9UQD0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCN8AQ9UQD0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 AL049796.1-201ENST00000565336 1766 ntBASIC20.71■□□□□ 0.91
SCN8AQ9UQD0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SCN8AQ9UQD0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCN8AQ9UQD0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms