Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 NCF1B-203ENST00000435988 1254 ntBASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 AC104771.1-201ENST00000603335 964 ntBASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NCKIPSDQ9NZQ3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NCKIPSDQ9NZQ3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 CROCCP5-201ENST00000436658 830 ntBASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 AL109923.1-201ENST00000618799 583 ntBASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NCKIPSDQ9NZQ3 AF106564.1-201ENST00000607058 2553 ntBASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCKIPSDQ9NZQ3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 AC104187.1-201ENST00000607510 612 ntBASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 AC231657.2-201ENST00000624556 255 ntBASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NCKIPSDQ9NZQ3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCKIPSDQ9NZQ3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCKIPSDQ9NZQ3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms