Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 DUX4L7-201ENST00000630678 1275 ntBASIC17.23■□□□□ 0.35
CALYQ9NYX4 DUX4L5-201ENST00000630834 1275 ntBASIC17.23■□□□□ 0.35
CALYQ9NYX4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CALYQ9NYX4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CALYQ9NYX4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CALYQ9NYX4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALYQ9NYX4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CALYQ9NYX4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALYQ9NYX4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 AC120498.10-201ENST00000621827 505 ntBASIC17.22■□□□□ 0.35
CALYQ9NYX4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.22■□□□□ 0.35
CALYQ9NYX4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALYQ9NYX4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 AP001160.3-201ENST00000601484 763 ntBASIC17.21■□□□□ 0.35
CALYQ9NYX4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CALYQ9NYX4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.21■□□□□ 0.35
CALYQ9NYX4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 KRT16P2-201ENST00000414673 1423 ntBASIC17.2■□□□□ 0.34
CALYQ9NYX4 AC004854.2-201ENST00000608450 1441 ntBASIC17.2■□□□□ 0.34
CALYQ9NYX4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CALYQ9NYX4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CALYQ9NYX4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CALYQ9NYX4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CALYQ9NYX4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CALYQ9NYX4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CALYQ9NYX4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms