Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 SLC7A5P1-201ENST00000568957 537 ntBASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN4Q9NRR5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.16■□□□□ 0.66
UBQLN4Q9NRR5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 AC245052.3-201ENST00000450182 901 ntBASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBQLN4Q9NRR5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
UBQLN4Q9NRR5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN4Q9NRR5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN4Q9NRR5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN4Q9NRR5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 MIR935-201ENST00000401179 91 ntBASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN4Q9NRR5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 AL162430.1-201ENST00000480705 870 ntBASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN4Q9NRR5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN4Q9NRR5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms