Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.57■■□□□ 1.04
HPS4Q9NQG7 AC080038.3-201ENST00000623346 1952 ntBASIC21.57■■□□□ 1.04
HPS4Q9NQG7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HPS4Q9NQG7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HPS4Q9NQG7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HPS4Q9NQG7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HPS4Q9NQG7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.54■■□□□ 1.04
HPS4Q9NQG7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 AC093827.2-201ENST00000512654 315 ntBASIC21.54■■□□□ 1.04
HPS4Q9NQG7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HPS4Q9NQG7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 AC091799.1-201ENST00000422823 811 ntBASIC21.53■■□□□ 1.04
HPS4Q9NQG7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HPS4Q9NQG7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 ESRRAP1-201ENST00000400596 1257 ntBASIC21.52■■□□□ 1.04
HPS4Q9NQG7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HPS4Q9NQG7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
HPS4Q9NQG7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.52■■□□□ 1.03
HPS4Q9NQG7 C1orf229-201ENST00000623686 2258 ntBASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms