Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.71■□□□□ 0.91
SSU72Q9NP77 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
SSU72Q9NP77 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SSU72Q9NP77 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.7■□□□□ 0.91
SSU72Q9NP77 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.7■□□□□ 0.91
SSU72Q9NP77 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSU72Q9NP77 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SSU72Q9NP77 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
SSU72Q9NP77 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SSU72Q9NP77 SMUG1P1-201ENST00000590640 811 ntBASIC20.7■□□□□ 0.9
SSU72Q9NP77 AC136469.2-201ENST00000623944 1028 ntBASIC20.7■□□□□ 0.9
SSU72Q9NP77 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SSU72Q9NP77 FP700111.2-201ENST00000619190 1892 ntBASIC20.7■□□□□ 0.9
SSU72Q9NP77 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSU72Q9NP77 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 BX005040.4-201ENST00000637145 1518 ntBASIC20.69■□□□□ 0.9
SSU72Q9NP77 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 SLC47A1P1-202ENST00000449666 945 ntBASIC20.69■□□□□ 0.9
SSU72Q9NP77 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSU72Q9NP77 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.69■□□□□ 0.9
SSU72Q9NP77 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.68■□□□□ 0.9
SSU72Q9NP77 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSU72Q9NP77 SYT6-210ENST00000641643 1587 ntBASIC20.68■□□□□ 0.9
SSU72Q9NP77 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.67■□□□□ 0.9
SSU72Q9NP77 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.67■□□□□ 0.9
SSU72Q9NP77 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SSU72Q9NP77 PCDHAC2-203ENST00000615316 3011 ntBASIC20.67■□□□□ 0.9
SSU72Q9NP77 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSU72Q9NP77 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.66■□□□□ 0.9
SSU72Q9NP77 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.66■□□□□ 0.9
SSU72Q9NP77 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 SERBP1P1-201ENST00000396021 1160 ntBASIC20.66■□□□□ 0.9
SSU72Q9NP77 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
SSU72Q9NP77 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.66■□□□□ 0.9
SSU72Q9NP77 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.66■□□□□ 0.9
SSU72Q9NP77 AC011298.3-201ENST00000615796 283 ntBASIC20.66■□□□□ 0.9
SSU72Q9NP77 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 AC011484.1-201ENST00000377652 1995 ntBASIC20.66■□□□□ 0.9
SSU72Q9NP77 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSU72Q9NP77 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SSU72Q9NP77 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.65■□□□□ 0.9
SSU72Q9NP77 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.65■□□□□ 0.9
SSU72Q9NP77 AC112907.3-201ENST00000577781 2400 ntBASIC20.65■□□□□ 0.9
SSU72Q9NP77 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.65■□□□□ 0.9
SSU72Q9NP77 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.65■□□□□ 0.9
SSU72Q9NP77 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms