Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 AC092368.3-202ENST00000574180 1591 ntBASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RC3H2Q9HBD1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
RC3H2Q9HBD1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RC3H2Q9HBD1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.18
RC3H2Q9HBD1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 AC068473.5-201ENST00000616428 2072 ntBASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 C1QBPP2-201ENST00000528754 825 ntBASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RC3H2Q9HBD1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 MIR4497-201ENST00000583208 89 ntBASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 AC069544.1-201ENST00000609399 999 ntBASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.38■■□□□ 1.17
RC3H2Q9HBD1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 MIR718-201ENST00000390190 70 ntBASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 AC010542.4-201ENST00000563151 1910 ntBASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
RC3H2Q9HBD1 CYP21A1P-202ENST00000354927 1481 ntBASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 KRT17P3-201ENST00000420566 1262 ntBASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 AC007322.3-201ENST00000426526 701 ntBASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 SOX15-203ENST00000570788 1093 ntBASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 Z99916.2-201ENST00000604037 246 ntBASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 AC080038.3-201ENST00000623346 1952 ntBASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RC3H2Q9HBD1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 FAM197Y4-202ENST00000622692 608 ntBASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
RC3H2Q9HBD1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RC3H2Q9HBD1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms