Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GSX1Q9H4S2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GSX1Q9H4S2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GSX1Q9H4S2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GSX1Q9H4S2 DUSP8P3-201ENST00000399571 1760 ntBASIC17.66■□□□□ 0.42
GSX1Q9H4S2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GSX1Q9H4S2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 RNF165-205ENST00000588679 2904 ntBASIC17.65■□□□□ 0.42
GSX1Q9H4S2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GSX1Q9H4S2 AC055733.4-201ENST00000638462 1354 ntBASIC17.65■□□□□ 0.42
GSX1Q9H4S2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GSX1Q9H4S2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.64■□□□□ 0.42
GSX1Q9H4S2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 C1orf229-201ENST00000623686 2258 ntBASIC17.64■□□□□ 0.41
GSX1Q9H4S2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GSX1Q9H4S2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 BX088651.1-201ENST00000540551 451 ntBASIC17.63■□□□□ 0.41
GSX1Q9H4S2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 AC008403.3-201ENST00000598924 454 ntBASIC17.63■□□□□ 0.41
GSX1Q9H4S2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GSX1Q9H4S2 AC010980.2-201ENST00000587099 1412 ntBASIC17.63■□□□□ 0.41
GSX1Q9H4S2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.62■□□□□ 0.41
GSX1Q9H4S2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.62■□□□□ 0.41
GSX1Q9H4S2 CYP2T3P-201ENST00000601990 817 ntBASIC17.62■□□□□ 0.41
GSX1Q9H4S2 AL445228.2-201ENST00000605589 952 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms