Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 MTND2P40-201ENST00000436718 841 ntBASIC22.88■■□□□ 1.25
RNF39Q9H2S5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 AL138781.1-201ENST00000566567 1274 ntBASIC22.88■■□□□ 1.25
RNF39Q9H2S5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF39Q9H2S5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 PAICSP2-201ENST00000429118 1150 ntBASIC22.87■■□□□ 1.25
RNF39Q9H2S5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 AC082651.2-201ENST00000496833 166 ntBASIC22.87■■□□□ 1.25
RNF39Q9H2S5 AC105036.2-201ENST00000569468 176 ntBASIC22.87■■□□□ 1.25
RNF39Q9H2S5 AC142086.2-201ENST00000569753 217 ntBASIC22.87■■□□□ 1.25
RNF39Q9H2S5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF39Q9H2S5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 AF201337.1-201ENST00000520239 748 ntBASIC22.86■■□□□ 1.25
RNF39Q9H2S5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 AC133552.2-202ENST00000575694 574 ntBASIC22.86■■□□□ 1.25
RNF39Q9H2S5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 AC120498.10-201ENST00000621827 505 ntBASIC22.86■■□□□ 1.25
RNF39Q9H2S5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
RNF39Q9H2S5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 AC068473.5-201ENST00000616428 2072 ntBASIC22.85■■□□□ 1.25
RNF39Q9H2S5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 AC092905.1-201ENST00000467527 949 ntBASIC22.85■■□□□ 1.25
RNF39Q9H2S5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 AC233723.2-201ENST00000623798 2106 ntBASIC22.85■■□□□ 1.25
RNF39Q9H2S5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RNF39Q9H2S5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 KRT16P2-201ENST00000414673 1423 ntBASIC22.84■■□□□ 1.25
RNF39Q9H2S5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 CYP2T1P-201ENST00000432607 1285 ntBASIC22.84■■□□□ 1.25
RNF39Q9H2S5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 AC007322.4-201ENST00000509611 723 ntBASIC22.84■■□□□ 1.25
RNF39Q9H2S5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF39Q9H2S5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 RBM17P2-201ENST00000616397 1405 ntBASIC22.83■■□□□ 1.25
RNF39Q9H2S5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 AC073310.1-201ENST00000423226 1033 ntBASIC22.83■■□□□ 1.25
RNF39Q9H2S5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 FGA-203ENST00000622532 1130 ntTSL 5 BASIC22.83■■□□□ 1.25
RNF39Q9H2S5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RNF39Q9H2S5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.83■■□□□ 1.24
RNF39Q9H2S5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF39Q9H2S5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RNF39Q9H2S5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
RNF39Q9H2S5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF39Q9H2S5 GUSBP5-202ENST00000510805 1989 ntBASIC22.82■■□□□ 1.24
RNF39Q9H2S5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF39Q9H2S5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms