Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LITAFQ99732 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LITAFQ99732 AL158211.5-201ENST00000623583 2518 ntBASIC13.9□□□□□ -0.18
LITAFQ99732 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LITAFQ99732 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.9□□□□□ -0.18
LITAFQ99732 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LITAFQ99732 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.9□□□□□ -0.18
LITAFQ99732 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 LETM1P2-201ENST00000597330 2178 ntBASIC13.9□□□□□ -0.18
LITAFQ99732 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.9□□□□□ -0.18
LITAFQ99732 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LITAFQ99732 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LITAFQ99732 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LITAFQ99732 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LITAFQ99732 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LITAFQ99732 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LITAFQ99732 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.89□□□□□ -0.19
LITAFQ99732 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LITAFQ99732 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.89□□□□□ -0.19
LITAFQ99732 AC139795.1-202ENST00000500444 432 ntBASIC13.89□□□□□ -0.19
LITAFQ99732 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.89□□□□□ -0.19
LITAFQ99732 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LITAFQ99732 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LITAFQ99732 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.88□□□□□ -0.19
LITAFQ99732 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.88□□□□□ -0.19
LITAFQ99732 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LITAFQ99732 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC13.88□□□□□ -0.19
LITAFQ99732 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LITAFQ99732 FP700111.2-201ENST00000619190 1892 ntBASIC13.88□□□□□ -0.19
LITAFQ99732 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.88□□□□□ -0.19
LITAFQ99732 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.88□□□□□ -0.19
LITAFQ99732 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.88□□□□□ -0.19
LITAFQ99732 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.88□□□□□ -0.19
LITAFQ99732 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LITAFQ99732 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.87□□□□□ -0.19
LITAFQ99732 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.87□□□□□ -0.19
LITAFQ99732 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.87□□□□□ -0.19
LITAFQ99732 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LITAFQ99732 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LITAFQ99732 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LITAFQ99732 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.87□□□□□ -0.19
LITAFQ99732 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
LITAFQ99732 AP004607.7-201ENST00000527152 1677 ntBASIC13.87□□□□□ -0.19
LITAFQ99732 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LITAFQ99732 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LITAFQ99732 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
LITAFQ99732 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
LITAFQ99732 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LITAFQ99732 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.86□□□□□ -0.19
LITAFQ99732 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms