Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.04■□□□□ 0.48
SDHCQ99643 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDHCQ99643 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.04■□□□□ 0.48
SDHCQ99643 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.04■□□□□ 0.48
SDHCQ99643 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 AC005332.7-201ENST00000614046 2005 ntBASIC18.03■□□□□ 0.48
SDHCQ99643 AC093503.3-201ENST00000624917 2352 ntBASIC18.03■□□□□ 0.48
SDHCQ99643 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SDHCQ99643 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDHCQ99643 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
SDHCQ99643 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.03■□□□□ 0.48
SDHCQ99643 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.03■□□□□ 0.48
SDHCQ99643 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.02■□□□□ 0.48
SDHCQ99643 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
SDHCQ99643 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SDHCQ99643 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SDHCQ99643 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SDHCQ99643 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDHCQ99643 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SDHCQ99643 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.02■□□□□ 0.47
SDHCQ99643 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDHCQ99643 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SDHCQ99643 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
SDHCQ99643 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.02■□□□□ 0.47
SDHCQ99643 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDHCQ99643 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SDHCQ99643 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
SDHCQ99643 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
SDHCQ99643 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SDHCQ99643 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.01■□□□□ 0.47
SDHCQ99643 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.01■□□□□ 0.47
SDHCQ99643 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
SDHCQ99643 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.01■□□□□ 0.47
SDHCQ99643 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.01■□□□□ 0.47
SDHCQ99643 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SDHCQ99643 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.01■□□□□ 0.47
SDHCQ99643 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18■□□□□ 0.47
SDHCQ99643 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18■□□□□ 0.47
SDHCQ99643 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 FP700111.2-201ENST00000619190 1892 ntBASIC18■□□□□ 0.47
SDHCQ99643 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SDHCQ99643 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SDHCQ99643 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18■□□□□ 0.47
SDHCQ99643 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18■□□□□ 0.47
SDHCQ99643 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18■□□□□ 0.47
SDHCQ99643 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SDHCQ99643 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SDHCQ99643 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SDHCQ99643 AP004607.7-201ENST00000527152 1677 ntBASIC17.99■□□□□ 0.47
SDHCQ99643 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SDHCQ99643 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.99■□□□□ 0.47
SDHCQ99643 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SDHCQ99643 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SDHCQ99643 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SDHCQ99643 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.99■□□□□ 0.47
SDHCQ99643 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SDHCQ99643 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms