Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 AC092437.1-201ENST00000624794 1048 ntBASIC17.37■□□□□ 0.37
GAFA1Q96PS6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
GAFA1Q96PS6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 AC005229.4-201ENST00000610085 2198 ntBASIC17.36■□□□□ 0.37
GAFA1Q96PS6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 MFSD11-216ENST00000590393 1141 ntBASIC17.36■□□□□ 0.37
GAFA1Q96PS6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 RBM17P2-201ENST00000616397 1405 ntBASIC17.36■□□□□ 0.37
GAFA1Q96PS6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GAFA1Q96PS6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GAFA1Q96PS6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.34■□□□□ 0.37
GAFA1Q96PS6 AC243732.1-201ENST00000612648 864 ntBASIC17.34■□□□□ 0.37
GAFA1Q96PS6 AC010536.3-201ENST00000620306 533 ntBASIC17.34■□□□□ 0.37
GAFA1Q96PS6 AL137060.1-201ENST00000618151 2648 ntBASIC17.34■□□□□ 0.37
GAFA1Q96PS6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GAFA1Q96PS6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 AC011767.1-201ENST00000617410 1153 ntBASIC17.33■□□□□ 0.36
GAFA1Q96PS6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.33■□□□□ 0.36
GAFA1Q96PS6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.32■□□□□ 0.36
GAFA1Q96PS6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.32■□□□□ 0.36
GAFA1Q96PS6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GAFA1Q96PS6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GAFA1Q96PS6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms