Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 AP001160.3-201ENST00000601484 763 ntBASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 AC004854.2-201ENST00000608450 1441 ntBASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A4EQ96PG1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MS4A4EQ96PG1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A4EQ96PG1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A4EQ96PG1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A4EQ96PG1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A4EQ96PG1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A4EQ96PG1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 AC245052.3-201ENST00000450182 901 ntBASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A4EQ96PG1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 KRT19P1-201ENST00000405746 1186 ntBASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 AC097381.1-201ENST00000429019 1296 ntBASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 KRT18P20-201ENST00000548986 1279 ntBASIC19.38■□□□□ 0.69
MS4A4EQ96PG1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms