Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 AC011484.1-201ENST00000377652 1995 ntBASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.38■□□□□ 0.85
PDLIM5Q96HC4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDLIM5Q96HC4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 AC004854.2-201ENST00000608450 1441 ntBASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM5Q96HC4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM5Q96HC4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM5Q96HC4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 AC245052.3-201ENST00000450182 901 ntBASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.33■□□□□ 0.85
PDLIM5Q96HC4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM5Q96HC4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms