Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.52■□□□□ 0.39
TIMD4Q96H15 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TIMD4Q96H15 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TIMD4Q96H15 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.52■□□□□ 0.39
TIMD4Q96H15 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TIMD4Q96H15 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
TIMD4Q96H15 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.51■□□□□ 0.39
TIMD4Q96H15 TSPY6P-201ENST00000448518 926 ntBASIC17.51■□□□□ 0.39
TIMD4Q96H15 CDV3P1-201ENST00000471403 739 ntBASIC17.51■□□□□ 0.39
TIMD4Q96H15 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMD4Q96H15 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMD4Q96H15 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.51■□□□□ 0.39
TIMD4Q96H15 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TIMD4Q96H15 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.5■□□□□ 0.39
TIMD4Q96H15 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.5■□□□□ 0.39
TIMD4Q96H15 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMD4Q96H15 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TIMD4Q96H15 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 C11orf96-202ENST00000528572 1834 ntBASIC17.49■□□□□ 0.39
TIMD4Q96H15 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.49■□□□□ 0.39
TIMD4Q96H15 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMD4Q96H15 AC012676.1-201ENST00000574705 1949 ntBASIC17.49■□□□□ 0.39
TIMD4Q96H15 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 MKRN4P-201ENST00000444706 1521 ntBASIC17.48■□□□□ 0.39
TIMD4Q96H15 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMD4Q96H15 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TIMD4Q96H15 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TIMD4Q96H15 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TIMD4Q96H15 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms