Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP6Q96FZ7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 BX323043.1-201ENST00000641006 1765 ntBASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP6Q96FZ7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 AC010997.5-201ENST00000609182 354 ntBASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP6Q96FZ7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 AL162377.1-201ENST00000618844 1793 ntBASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP6Q96FZ7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP6Q96FZ7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 AL499627.2-201ENST00000606283 725 ntBASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP6Q96FZ7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CHMP6Q96FZ7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP6Q96FZ7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.89■□□□□ 0.94
CHMP6Q96FZ7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP6Q96FZ7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.89■□□□□ 0.94
CHMP6Q96FZ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 AC007225.1-201ENST00000566331 1836 ntBASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP6Q96FZ7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms