Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 EEF1DP3-203ENST00000566025 782 ntBASIC18.69■□□□□ 0.58
LRRC46Q96FV0 MIR4758-201ENST00000577688 71 ntBASIC18.69■□□□□ 0.58
LRRC46Q96FV0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 AP006587.3-201ENST00000525742 1516 ntBASIC18.69■□□□□ 0.58
LRRC46Q96FV0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRRC46Q96FV0 GUSBP5-202ENST00000510805 1989 ntBASIC18.68■□□□□ 0.58
LRRC46Q96FV0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 POU5F1P4-201ENST00000413175 1085 ntBASIC18.68■□□□□ 0.58
LRRC46Q96FV0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 AC073210.2-201ENST00000430369 194 ntBASIC18.68■□□□□ 0.58
LRRC46Q96FV0 AC069152.1-201ENST00000438030 544 ntBASIC18.68■□□□□ 0.58
LRRC46Q96FV0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC46Q96FV0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 FAM201B-201ENST00000458407 597 ntBASIC18.67■□□□□ 0.58
LRRC46Q96FV0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC46Q96FV0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 AC007322.4-201ENST00000509611 723 ntBASIC18.66■□□□□ 0.58
LRRC46Q96FV0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC46Q96FV0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 CNN2P6-201ENST00000439038 900 ntBASIC18.65■□□□□ 0.58
LRRC46Q96FV0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 OR10C1-204ENST00000622521 1039 ntBASIC18.65■□□□□ 0.58
LRRC46Q96FV0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC46Q96FV0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC46Q96FV0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC46Q96FV0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.64■□□□□ 0.58
LRRC46Q96FV0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC46Q96FV0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC46Q96FV0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC46Q96FV0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms