Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF31Q96EP0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF31Q96EP0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.06■□□□□ 0.8
RNF31Q96EP0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNF31Q96EP0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RNF31Q96EP0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF31Q96EP0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF31Q96EP0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF31Q96EP0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF31Q96EP0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF31Q96EP0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
RNF31Q96EP0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF31Q96EP0 KRT18P6-201ENST00000555540 1265 ntBASIC20.05■□□□□ 0.8
RNF31Q96EP0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF31Q96EP0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF31Q96EP0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF31Q96EP0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 KRT18P20-201ENST00000548986 1279 ntBASIC20.03■□□□□ 0.8
RNF31Q96EP0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 AC013268.1-206ENST00000638368 961 ntBASIC20.03■□□□□ 0.8
RNF31Q96EP0 AC112229.1-201ENST00000639295 961 ntBASIC20.03■□□□□ 0.8
RNF31Q96EP0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF31Q96EP0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF31Q96EP0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF31Q96EP0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF31Q96EP0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 AC069152.1-201ENST00000438030 544 ntBASIC20.02■□□□□ 0.8
RNF31Q96EP0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF31Q96EP0 AC008175.2-201ENST00000612840 297 ntBASIC20.02■□□□□ 0.8
RNF31Q96EP0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF31Q96EP0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF31Q96EP0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF31Q96EP0 AC092053.2-201ENST00000640557 1818 ntBASIC20.02■□□□□ 0.79
RNF31Q96EP0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF31Q96EP0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF31Q96EP0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF31Q96EP0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF31Q96EP0 MKRN4P-201ENST00000444706 1521 ntBASIC20.02■□□□□ 0.79
RNF31Q96EP0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RNF31Q96EP0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms