Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL499627.2-201ENST00000606283 725 ntBASIC18.35■□□□□ 0.53
AP3S1Q92572 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S1Q92572 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AP3S1Q92572 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AP3S1Q92572 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.35■□□□□ 0.53
AP3S1Q92572 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.34■□□□□ 0.53
AP3S1Q92572 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S1Q92572 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S1Q92572 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3S1Q92572 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S1Q92572 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S1Q92572 AL034346.1-201ENST00000568244 1277 ntBASIC18.34■□□□□ 0.53
AP3S1Q92572 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
AP3S1Q92572 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S1Q92572 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AP3S1Q92572 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
AP3S1Q92572 AIRN-201ENST00000601203 4374 ntBASIC18.34■□□□□ 0.53
AP3S1Q92572 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.33■□□□□ 0.53
AP3S1Q92572 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S1Q92572 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
AP3S1Q92572 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S1Q92572 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S1Q92572 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S1Q92572 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
AP3S1Q92572 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.33■□□□□ 0.53
AP3S1Q92572 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.33■□□□□ 0.53
AP3S1Q92572 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.33■□□□□ 0.53
AP3S1Q92572 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
AP3S1Q92572 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
AP3S1Q92572 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.33■□□□□ 0.52
AP3S1Q92572 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
AP3S1Q92572 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AP3S1Q92572 AC007225.1-201ENST00000566331 1836 ntBASIC18.33■□□□□ 0.52
AP3S1Q92572 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AP3S1Q92572 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AP3S1Q92572 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.32■□□□□ 0.52
AP3S1Q92572 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
AP3S1Q92572 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.32■□□□□ 0.52
AP3S1Q92572 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
AP3S1Q92572 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.32■□□□□ 0.52
AP3S1Q92572 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 AL162377.1-201ENST00000618844 1793 ntBASIC18.32■□□□□ 0.52
AP3S1Q92572 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
AP3S1Q92572 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AP3S1Q92572 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP3S1Q92572 AC009102.2-201ENST00000606772 1639 ntBASIC18.31■□□□□ 0.52
AP3S1Q92572 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP3S1Q92572 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3S1Q92572 HCG11-201ENST00000411553 5696 ntBASIC18.31■□□□□ 0.52
AP3S1Q92572 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3S1Q92572 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 AC121338.2-201ENST00000622535 1744 ntBASIC18.31■□□□□ 0.52
AP3S1Q92572 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3S1Q92572 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.31■□□□□ 0.52
AP3S1Q92572 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3S1Q92572 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S1Q92572 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
AP3S1Q92572 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3S1Q92572 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3S1Q92572 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3S1Q92572 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S1Q92572 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3S1Q92572 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S1Q92572 AC003102.1-202ENST00000563394 1796 ntBASIC18.3■□□□□ 0.52
AP3S1Q92572 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3S1Q92572 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3S1Q92572 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3S1Q92572 BHLHE23-202ENST00000612929 1109 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms