Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.59■■□□□ 1.69
SNED1Q8TER0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNED1Q8TER0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.59■■□□□ 1.69
SNED1Q8TER0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNED1Q8TER0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNED1Q8TER0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SNED1Q8TER0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.59■■□□□ 1.69
SNED1Q8TER0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SNED1Q8TER0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
SNED1Q8TER0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SNED1Q8TER0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SNED1Q8TER0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
SNED1Q8TER0 AC245052.3-201ENST00000450182 901 ntBASIC25.58■■□□□ 1.69
SNED1Q8TER0 CDV3P1-201ENST00000471403 739 ntBASIC25.58■■□□□ 1.69
SNED1Q8TER0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.58■■□□□ 1.69
SNED1Q8TER0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.58■■□□□ 1.69
SNED1Q8TER0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.58■■□□□ 1.69
SNED1Q8TER0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNED1Q8TER0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.58■■□□□ 1.68
SNED1Q8TER0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.57■■□□□ 1.68
SNED1Q8TER0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNED1Q8TER0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNED1Q8TER0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNED1Q8TER0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.57■■□□□ 1.68
SNED1Q8TER0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.57■■□□□ 1.68
SNED1Q8TER0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.57■■□□□ 1.68
SNED1Q8TER0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
SNED1Q8TER0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SNED1Q8TER0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
SNED1Q8TER0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.56■■□□□ 1.68
SNED1Q8TER0 KRT17P3-201ENST00000420566 1262 ntBASIC25.56■■□□□ 1.68
SNED1Q8TER0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SNED1Q8TER0 AC012618.2-201ENST00000428058 849 ntBASIC25.56■■□□□ 1.68
SNED1Q8TER0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.56■■□□□ 1.68
SNED1Q8TER0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.56■■□□□ 1.68
SNED1Q8TER0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
SNED1Q8TER0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SNED1Q8TER0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SNED1Q8TER0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SNED1Q8TER0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
SNED1Q8TER0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SNED1Q8TER0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 AC211429.1-201ENST00000415277 523 ntBASIC25.54■■□□□ 1.68
SNED1Q8TER0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 CYP21A1P-202ENST00000354927 1481 ntBASIC25.54■■□□□ 1.68
SNED1Q8TER0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 KRT18P68-201ENST00000392293 1000 ntBASIC25.54■■□□□ 1.68
SNED1Q8TER0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
SNED1Q8TER0 POM121L13P-201ENST00000422362 380 ntBASIC25.54■■□□□ 1.68
SNED1Q8TER0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.54■■□□□ 1.68
SNED1Q8TER0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 AC233702.5-201ENST00000584107 538 ntBASIC25.54■■□□□ 1.68
SNED1Q8TER0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SNED1Q8TER0 C11orf96-202ENST00000528572 1834 ntBASIC25.53■■□□□ 1.68
SNED1Q8TER0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SNED1Q8TER0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNED1Q8TER0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNED1Q8TER0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.53■■□□□ 1.68
SNED1Q8TER0 AC105020.6-201ENST00000621523 1217 ntBASIC25.53■■□□□ 1.68
SNED1Q8TER0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SNED1Q8TER0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNED1Q8TER0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.52■■□□□ 1.68
SNED1Q8TER0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SNED1Q8TER0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNED1Q8TER0 AC026471.6-201ENST00000622954 1905 ntBASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms