Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KRT17P2-201ENST00000300992 1314 ntBASIC19.72■□□□□ 0.75
SNIP1Q8TAD8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNIP1Q8TAD8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNIP1Q8TAD8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNIP1Q8TAD8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNIP1Q8TAD8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 AC079834.2-201ENST00000609776 1949 ntBASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 SOX15-203ENST00000570788 1093 ntBASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.69■□□□□ 0.74
SNIP1Q8TAD8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 MCRIP2P1-201ENST00000394346 511 ntBASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 CDV3P1-201ENST00000471403 739 ntBASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 AC061975.6-201ENST00000579045 1553 ntBASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNIP1Q8TAD8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 RPS2P55-201ENST00000397318 883 ntBASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 AC107956.1-201ENST00000494359 873 ntBASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNIP1Q8TAD8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 POM121L13P-201ENST00000422362 380 ntBASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 AC091799.1-201ENST00000422823 811 ntBASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SNIP1Q8TAD8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms