Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 AL391121.1-201ENST00000607967 1349 ntBASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SPTSSBQ8NFR3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 HLA-L-211ENST00000482052 1765 ntBASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 NOC2LP1-202ENST00000452600 2235 ntBASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
SPTSSBQ8NFR3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 AC005332.8-201ENST00000622750 2735 ntBASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SPTSSBQ8NFR3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 SETD8P1-201ENST00000623146 1180 ntBASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.45□□□□□ -0.58
SPTSSBQ8NFR3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SPTSSBQ8NFR3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms