Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AC083880.1-201ENST00000608266 535 ntBASIC22.7■■□□□ 1.22
RNF169Q8NCN4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF169Q8NCN4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 DUSP5P2-201ENST00000426873 1033 ntBASIC22.69■■□□□ 1.22
RNF169Q8NCN4 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.69■■□□□ 1.22
RNF169Q8NCN4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 AC066615.1-201ENST00000640911 628 ntBASIC22.69■■□□□ 1.22
RNF169Q8NCN4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RNF169Q8NCN4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.68■■□□□ 1.22
RNF169Q8NCN4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 AC233723.2-201ENST00000623798 2106 ntBASIC22.68■■□□□ 1.22
RNF169Q8NCN4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF169Q8NCN4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 KRT18P29-201ENST00000397031 1267 ntBASIC22.67■■□□□ 1.22
RNF169Q8NCN4 LSM12P1-201ENST00000411836 588 ntBASIC22.67■■□□□ 1.22
RNF169Q8NCN4 AL355472.2-201ENST00000422958 438 ntBASIC22.67■■□□□ 1.22
RNF169Q8NCN4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF169Q8NCN4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 AC091799.1-201ENST00000422823 811 ntBASIC22.66■■□□□ 1.22
RNF169Q8NCN4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 AC091874.3-201ENST00000512672 1195 ntBASIC22.66■■□□□ 1.22
RNF169Q8NCN4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF169Q8NCN4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 MYC-209ENST00000641252 345 ntBASIC22.65■■□□□ 1.22
RNF169Q8NCN4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF169Q8NCN4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RNF169Q8NCN4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms