Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.3■■□□□ 1
PCDH20Q8N6Y1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 TERF1P5-201ENST00000477545 1207 ntBASIC21.29■■□□□ 1
PCDH20Q8N6Y1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH20Q8N6Y1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 AC007322.1-201ENST00000426983 750 ntBASIC21.28■■□□□ 1
PCDH20Q8N6Y1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 AC013268.1-206ENST00000638368 961 ntBASIC21.28■■□□□ 1
PCDH20Q8N6Y1 AC112229.1-201ENST00000639295 961 ntBASIC21.28■■□□□ 1
PCDH20Q8N6Y1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH20Q8N6Y1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH20Q8N6Y1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH20Q8N6Y1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH20Q8N6Y1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 CROCCP5-201ENST00000436658 830 ntBASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 CNN2P6-201ENST00000439038 900 ntBASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 AC006970.2-201ENST00000450065 779 ntBASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH20Q8N6Y1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 AC007322.4-201ENST00000509611 723 ntBASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 AC243732.1-201ENST00000612648 864 ntBASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH20Q8N6Y1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 MIR663A-201ENST00000385250 93 ntBASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH20Q8N6Y1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 RBM17P2-201ENST00000616397 1405 ntBASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDH20Q8N6Y1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms