Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PHTF2Q8N3S3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
PHTF2Q8N3S3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.57■■□□□ 1.04
PHTF2Q8N3S3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.57■■□□□ 1.04
PHTF2Q8N3S3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PHTF2Q8N3S3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PHTF2Q8N3S3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AC003102.1-202ENST00000563394 1796 ntBASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 RBM17P2-201ENST00000616397 1405 ntBASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AC093787.1-201ENST00000450396 207 ntBASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 TSPY20P-201ENST00000450910 630 ntBASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 AC120498.10-201ENST00000621827 505 ntBASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 OR10C1-204ENST00000622521 1039 ntBASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.56■■□□□ 1.04
PHTF2Q8N3S3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PHTF2Q8N3S3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 AC061975.6-201ENST00000579045 1553 ntBASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 MIPEPP3-201ENST00000412105 444 ntBASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 MIR4651-201ENST00000582622 73 ntBASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 AC016405.3-201ENST00000607710 860 ntBASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PHTF2Q8N3S3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 AL512625.2-201ENST00000417533 625 ntBASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 TMEM191A-211ENST00000637163 1067 ntBASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 MKRN4P-201ENST00000444706 1521 ntBASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
PHTF2Q8N3S3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 AC243732.1-201ENST00000612648 864 ntBASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.52■■□□□ 1.04
PHTF2Q8N3S3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms