Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 AL158211.5-201ENST00000623583 2518 ntBASIC18.17■□□□□ 0.5
CCDC190Q86UF4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CCDC190Q86UF4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC190Q86UF4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 AC005703.6-201ENST00000623265 1329 ntBASIC18.15■□□□□ 0.5
CCDC190Q86UF4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC190Q86UF4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.14■□□□□ 0.5
CCDC190Q86UF4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 NEFHP1-201ENST00000412845 2629 ntBASIC18.14■□□□□ 0.49
CCDC190Q86UF4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 ABHD17AP4-201ENST00000411545 909 ntBASIC18.14■□□□□ 0.49
CCDC190Q86UF4 GPX1-201ENST00000419349 1106 ntBASIC18.14■□□□□ 0.49
CCDC190Q86UF4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC190Q86UF4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC190Q86UF4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC190Q86UF4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC190Q86UF4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC190Q86UF4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms