Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.79■□□□□ 0.92
LDB1Q86U70 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.79■□□□□ 0.92
LDB1Q86U70 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L2-201ENST00000561772 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L6-201ENST00000626483 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L1-201ENST00000627662 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L8-201ENST00000629013 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L3-201ENST00000630187 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L7-201ENST00000630678 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 DUX4L5-201ENST00000630834 1275 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
LDB1Q86U70 AP004607.4-201ENST00000530158 1459 ntBASIC20.79■□□□□ 0.92
LDB1Q86U70 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.79■□□□□ 0.92
LDB1Q86U70 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.78■□□□□ 0.92
LDB1Q86U70 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
LDB1Q86U70 PLK5-205ENST00000642079 1969 ntBASIC20.78■□□□□ 0.92
LDB1Q86U70 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.78■□□□□ 0.92
LDB1Q86U70 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LDB1Q86U70 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.78■□□□□ 0.92
LDB1Q86U70 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.78■□□□□ 0.92
LDB1Q86U70 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.78■□□□□ 0.92
LDB1Q86U70 AC138907.5-202ENST00000569484 235 ntBASIC20.78■□□□□ 0.92
LDB1Q86U70 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.78■□□□□ 0.92
LDB1Q86U70 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.78■□□□□ 0.92
LDB1Q86U70 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDB1Q86U70 AL157384.1-201ENST00000445995 2473 ntBASIC20.78■□□□□ 0.92
LDB1Q86U70 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.77■□□□□ 0.92
LDB1Q86U70 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.77■□□□□ 0.92
LDB1Q86U70 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.77■□□□□ 0.92
LDB1Q86U70 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LDB1Q86U70 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.77■□□□□ 0.92
LDB1Q86U70 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDB1Q86U70 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDB1Q86U70 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDB1Q86U70 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDB1Q86U70 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.77■□□□□ 0.92
LDB1Q86U70 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LDB1Q86U70 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.77■□□□□ 0.92
LDB1Q86U70 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.77■□□□□ 0.92
LDB1Q86U70 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.77■□□□□ 0.92
LDB1Q86U70 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.77■□□□□ 0.92
LDB1Q86U70 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDB1Q86U70 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.77■□□□□ 0.91
LDB1Q86U70 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LDB1Q86U70 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.77■□□□□ 0.91
LDB1Q86U70 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LDB1Q86U70 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LDB1Q86U70 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.76■□□□□ 0.91
LDB1Q86U70 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 AC010141.2-201ENST00000452426 721 ntBASIC20.76■□□□□ 0.91
LDB1Q86U70 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.76■□□□□ 0.91
LDB1Q86U70 SLC7A5P2-201ENST00000553010 536 ntBASIC20.76■□□□□ 0.91
LDB1Q86U70 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.76■□□□□ 0.91
LDB1Q86U70 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.76■□□□□ 0.91
LDB1Q86U70 AC087623.3-201ENST00000607047 1098 ntBASIC20.76■□□□□ 0.91
LDB1Q86U70 AC008175.2-201ENST00000612840 297 ntBASIC20.76■□□□□ 0.91
LDB1Q86U70 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LDB1Q86U70 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.76■□□□□ 0.91
LDB1Q86U70 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDB1Q86U70 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.75■□□□□ 0.91
LDB1Q86U70 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.75■□□□□ 0.91
LDB1Q86U70 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LDB1Q86U70 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.75■□□□□ 0.91
LDB1Q86U70 AP001160.3-201ENST00000601484 763 ntBASIC20.75■□□□□ 0.91
LDB1Q86U70 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.75■□□□□ 0.91
LDB1Q86U70 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.75■□□□□ 0.91
LDB1Q86U70 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDB1Q86U70 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LDB1Q86U70 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDB1Q86U70 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LDB1Q86U70 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LDB1Q86U70 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms