Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 POU5F1P4-201ENST00000413175 1085 ntBASIC14.63□□□□□ -0.07
CSMD3Q7Z407 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 KRT18P35-201ENST00000510488 1269 ntBASIC14.63□□□□□ -0.07
CSMD3Q7Z407 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 MTDHP1-201ENST00000605323 784 ntBASIC14.63□□□□□ -0.07
CSMD3Q7Z407 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.63□□□□□ -0.07
CSMD3Q7Z407 AC087499.1-201ENST00000418141 1075 ntBASIC14.63□□□□□ -0.07
CSMD3Q7Z407 MIR4785-201ENST00000585005 73 ntBASIC14.63□□□□□ -0.07
CSMD3Q7Z407 AC133561.5-201ENST00000635547 218 ntBASIC14.63□□□□□ -0.07
CSMD3Q7Z407 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 CD177P1-201ENST00000606252 935 ntBASIC14.62□□□□□ -0.07
CSMD3Q7Z407 AC243732.1-201ENST00000612648 864 ntBASIC14.62□□□□□ -0.07
CSMD3Q7Z407 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.62□□□□□ -0.07
CSMD3Q7Z407 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 TMPOP1-202ENST00000424642 1267 ntBASIC14.61□□□□□ -0.07
CSMD3Q7Z407 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.61□□□□□ -0.07
CSMD3Q7Z407 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.61□□□□□ -0.07
CSMD3Q7Z407 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.6□□□□□ -0.07
CSMD3Q7Z407 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 AC092865.7-201ENST00000641832 219 ntBASIC14.59□□□□□ -0.07
CSMD3Q7Z407 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.59□□□□□ -0.07
CSMD3Q7Z407 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms