Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.15■■□□□ 1.14
VARS2Q5ST30 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.15■■□□□ 1.14
VARS2Q5ST30 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.15■■□□□ 1.14
VARS2Q5ST30 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.15■■□□□ 1.14
VARS2Q5ST30 ECEL1P1-201ENST00000373592 1742 ntBASIC22.14■■□□□ 1.14
VARS2Q5ST30 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
VARS2Q5ST30 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.14
VARS2Q5ST30 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.14
VARS2Q5ST30 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 DUSP5P2-201ENST00000426873 1033 ntBASIC22.14■■□□□ 1.13
VARS2Q5ST30 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 AC097658.1-201ENST00000475555 843 ntBASIC22.14■■□□□ 1.13
VARS2Q5ST30 AC091874.3-201ENST00000512672 1195 ntBASIC22.14■■□□□ 1.13
VARS2Q5ST30 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.14■■□□□ 1.13
VARS2Q5ST30 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VARS2Q5ST30 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.13■■□□□ 1.13
VARS2Q5ST30 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.13■■□□□ 1.13
VARS2Q5ST30 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VARS2Q5ST30 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
VARS2Q5ST30 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VARS2Q5ST30 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.13■■□□□ 1.13
VARS2Q5ST30 AL355472.2-201ENST00000422958 438 ntBASIC22.13■■□□□ 1.13
VARS2Q5ST30 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.13■■□□□ 1.13
VARS2Q5ST30 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
VARS2Q5ST30 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VARS2Q5ST30 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
VARS2Q5ST30 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VARS2Q5ST30 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
VARS2Q5ST30 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VARS2Q5ST30 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VARS2Q5ST30 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VARS2Q5ST30 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.12■■□□□ 1.13
VARS2Q5ST30 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VARS2Q5ST30 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VARS2Q5ST30 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 LSM12P1-201ENST00000411836 588 ntBASIC22.11■■□□□ 1.13
VARS2Q5ST30 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.11■■□□□ 1.13
VARS2Q5ST30 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 AC100791.3-201ENST00000617619 330 ntBASIC22.11■■□□□ 1.13
VARS2Q5ST30 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
VARS2Q5ST30 KRT17P1-201ENST00000399211 1546 ntBASIC22.11■■□□□ 1.13
VARS2Q5ST30 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
VARS2Q5ST30 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.1■■□□□ 1.13
VARS2Q5ST30 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.1■■□□□ 1.13
VARS2Q5ST30 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.1■■□□□ 1.13
VARS2Q5ST30 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
VARS2Q5ST30 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.1■■□□□ 1.13
VARS2Q5ST30 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.1■■□□□ 1.13
VARS2Q5ST30 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VARS2Q5ST30 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VARS2Q5ST30 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VARS2Q5ST30 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.09■■□□□ 1.13
VARS2Q5ST30 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VARS2Q5ST30 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VARS2Q5ST30 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.09■■□□□ 1.13
VARS2Q5ST30 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VARS2Q5ST30 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.09■■□□□ 1.13
VARS2Q5ST30 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.09■■□□□ 1.13
VARS2Q5ST30 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.09■■□□□ 1.13
VARS2Q5ST30 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VARS2Q5ST30 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms