Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 AST2YER101C 1293 nt2.84□□□□□ -1.95
RUP1Q12242 YHR086W-AYHR086W-A 162 nt2.84□□□□□ -1.95
RUP1Q12242 TPK3YKL166C 1197 nt2.84□□□□□ -1.95
RUP1Q12242 YNL089CYNL089C 477 nt2.84□□□□□ -1.95
RUP1Q12242 RUF5-1RUF5-1 710 nt2.84□□□□□ -1.95
RUP1Q12242 RUF5-2RUF5-2 710 nt2.84□□□□□ -1.95
RUP1Q12242 TIM12YBR091C 330 nt2.84□□□□□ -1.95
RUP1Q12242 HBT1YDL223C 3141 nt2.83□□□□□ -1.96
RUP1Q12242 DSF2YBR007C 2211 nt2.83□□□□□ -1.96
RUP1Q12242 SRD1YCR018C 666 nt2.83□□□□□ -1.96
RUP1Q12242 NSE4YDL105W 1209 nt2.83□□□□□ -1.96
RUP1Q12242 DUF1YOL087C 3351 nt2.83□□□□□ -1.96
RUP1Q12242 ROG1YGL144C 2058 nt2.83□□□□□ -1.96
RUP1Q12242 SAP1YER047C 2694 nt2.83□□□□□ -1.96
RUP1Q12242 DBF20YPR111W 1695 nt2.82□□□□□ -1.96
RUP1Q12242 SKO1YNL167C 1944 nt2.82□□□□□ -1.96
RUP1Q12242 SOK1YDR006C 2706 nt2.82□□□□□ -1.96
RUP1Q12242 snR83snR83 306 nt2.82□□□□□ -1.96
RUP1Q12242 RAV2YDR202C 1056 nt2.82□□□□□ -1.96
RUP1Q12242 YDR442WYDR442W 393 nt2.82□□□□□ -1.96
RUP1Q12242 YFL012WYFL012W 447 nt2.82□□□□□ -1.96
RUP1Q12242 VEL1YGL258W 621 nt2.82□□□□□ -1.96
RUP1Q12242 YIL174WYIL174W 228 nt2.82□□□□□ -1.96
RUP1Q12242 RPS22AYJL190C 393 nt2.82□□□□□ -1.96
RUP1Q12242 YJL222W-AYJL222W-A 228 nt2.82□□□□□ -1.96
RUP1Q12242 CAP1YKL007W 807 nt2.82□□□□□ -1.96
RUP1Q12242 YKL222CYKL222C 2118 nt2.82□□□□□ -1.96
RUP1Q12242 ADI1YMR009W 540 nt2.82□□□□□ -1.96
RUP1Q12242 RCE1YMR274C 948 nt2.82□□□□□ -1.96
RUP1Q12242 ATP20YPR020W 348 nt2.82□□□□□ -1.96
RUP1Q12242 KIN82YCR091W 2163 nt2.82□□□□□ -1.96
RUP1Q12242 VPS38YLR360W 1320 nt2.82□□□□□ -1.96
RUP1Q12242 NDT80YHR124W 1884 nt2.82□□□□□ -1.96
RUP1Q12242 VAS1YGR094W 3315 nt2.81□□□□□ -1.96
RUP1Q12242 NET1YJL076W 3570 nt2.81□□□□□ -1.96
RUP1Q12242 GYP7YDL234C 2241 nt2.81□□□□□ -1.96
RUP1Q12242 YGL159WYGL159W 1113 nt2.81□□□□□ -1.96
RUP1Q12242 ATG27YJL178C 816 nt2.81□□□□□ -1.96
RUP1Q12242 CPR7YJR032W 1182 nt2.81□□□□□ -1.96
RUP1Q12242 SRL3YKR091W 741 nt2.81□□□□□ -1.96
RUP1Q12242 YLL044WYLL044W 447 nt2.81□□□□□ -1.96
RUP1Q12242 SWD3YBR175W 948 nt2.81□□□□□ -1.96
RUP1Q12242 NSA1YGL111W 1392 nt2.81□□□□□ -1.96
RUP1Q12242 RAD18YCR066W 1464 nt2.81□□□□□ -1.96
RUP1Q12242 NUM1YDR150W 8247 nt2.81□□□□□ -1.96
RUP1Q12242 YDR034C-DYDR034C-D 5313 nt2.8□□□□□ -1.96
RUP1Q12242 MSH4YFL003C 2637 nt2.8□□□□□ -1.96
RUP1Q12242 EXO84YBR102C 2262 nt2.8□□□□□ -1.96
RUP1Q12242 SWR1YDR334W 4545 nt2.8□□□□□ -1.96
RUP1Q12242 TLC1TLC1 1301 nt2.8□□□□□ -1.96
RUP1Q12242 GPM2YDL021W 936 nt2.8□□□□□ -1.96
RUP1Q12242 YDR203WYDR203W 318 nt2.8□□□□□ -1.96
RUP1Q12242 YGR160WYGR160W 612 nt2.8□□□□□ -1.96
RUP1Q12242 ATP11YNL315C 957 nt2.8□□□□□ -1.96
RUP1Q12242 CSI2YOL007C 1026 nt2.8□□□□□ -1.96
RUP1Q12242 CUR1YPR158W 759 nt2.8□□□□□ -1.96
RUP1Q12242 ARL1YBR164C 552 nt2.8□□□□□ -1.96
RUP1Q12242 NTC20YBR188C 423 nt2.8□□□□□ -1.96
RUP1Q12242 YME2YMR302C 2553 nt2.8□□□□□ -1.96
RUP1Q12242 YIL169CYIL169C 2988 nt2.79□□□□□ -1.96
RUP1Q12242 YOR296WYOR296W 3870 nt2.79□□□□□ -1.96
RUP1Q12242 BRE5YNR051C 1548 nt2.79□□□□□ -1.96
RUP1Q12242 AVT2YEL064C 1443 nt2.79□□□□□ -1.96
RUP1Q12242 21S_rRNA21S_rRNA 3296 nt2.79□□□□□ -1.96
RUP1Q12242 ILS1YBL076C 3219 nt2.79□□□□□ -1.96
RUP1Q12242 YCR045W-AYCR045W-A 351 nt2.79□□□□□ -1.96
RUP1Q12242 SNA4YDL123W 423 nt2.79□□□□□ -1.96
RUP1Q12242 MRH1YDR033W 963 nt2.79□□□□□ -1.96
RUP1Q12242 SLU7YDR088C 1149 nt2.79□□□□□ -1.96
RUP1Q12242 RMT2YDR465C 1239 nt2.79□□□□□ -1.96
RUP1Q12242 RNR2YJL026W 1200 nt2.79□□□□□ -1.96
RUP1Q12242 YPT52YKR014C 705 nt2.79□□□□□ -1.96
RUP1Q12242 YPT6YLR262C 648 nt2.79□□□□□ -1.96
RUP1Q12242 RXT2YBR095C 1293 nt2.79□□□□□ -1.96
RUP1Q12242 PFF1YBR074W 2931 nt2.79□□□□□ -1.96
RUP1Q12242 HFM1YGL251C 3564 nt2.79□□□□□ -1.96
RUP1Q12242 MAK5YBR142W 2322 nt2.79□□□□□ -1.96
RUP1Q12242 YIL082W-AYIL082W-A 4497 nt2.78□□□□□ -1.96
RUP1Q12242 TOM70YNL121C 1854 nt2.78□□□□□ -1.96
RUP1Q12242 RSN1YMR266W 2862 nt2.78□□□□□ -1.96
RUP1Q12242 YDR262WYDR262W 819 nt2.78□□□□□ -1.96
RUP1Q12242 RPL23BYER117W 414 nt2.78□□□□□ -1.96
RUP1Q12242 LOC1YFR001W 615 nt2.78□□□□□ -1.96
RUP1Q12242 YAL031W-AYAL031W-A 309 nt2.78□□□□□ -1.96
RUP1Q12242 MCR1YKL150W 909 nt2.78□□□□□ -1.96
RUP1Q12242 RIM9YMR063W 720 nt2.78□□□□□ -1.96
RUP1Q12242 YNL043CYNL043C 321 nt2.78□□□□□ -1.96
RUP1Q12242 ATX1YNL259C 222 nt2.78□□□□□ -1.96
RUP1Q12242 RPL23AYBL087C 414 nt2.78□□□□□ -1.96
RUP1Q12242 BRX1YOL077C 876 nt2.78□□□□□ -1.96
RUP1Q12242 RPL33AYPL143W 324 nt2.78□□□□□ -1.96
RUP1Q12242 MRPL40YPL173W 894 nt2.78□□□□□ -1.96
RUP1Q12242 YBR063CYBR063C 1215 nt2.78□□□□□ -1.96
RUP1Q12242 MED1YPR070W 1701 nt2.78□□□□□ -1.96
RUP1Q12242 FRE2YKL220C 2136 nt2.78□□□□□ -1.96
RUP1Q12242 HOP1YIL072W 1818 nt2.77□□□□□ -1.97
RUP1Q12242 FUS2YMR232W 2034 nt2.77□□□□□ -1.97
RUP1Q12242 SAE2YGL175C 1038 nt2.77□□□□□ -1.97
RUP1Q12242 YGR017WYGR017W 894 nt2.77□□□□□ -1.97
RUP1Q12242 YGR115CYGR115C 780 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms