Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 POL30YBR088C 777 nt2.52□□□□□ -2.01
CLP1Q08685 ICS2YBR157C 768 nt2.52□□□□□ -2.01
CLP1Q08685 PEX34YCL056C 435 nt2.52□□□□□ -2.01
CLP1Q08685 ROY1YMR258C 1662 nt2.52□□□□□ -2.01
CLP1Q08685 VAC14YLR386W 2643 nt2.52□□□□□ -2.01
CLP1Q08685 YLR108CYLR108C 1458 nt2.52□□□□□ -2.01
CLP1Q08685 YDR034C-CYDR034C-C 1317 nt2.51□□□□□ -2.01
CLP1Q08685 YLR410W-AYLR410W-A 1317 nt2.51□□□□□ -2.01
CLP1Q08685 RPL24BYGR148C 468 nt2.51□□□□□ -2.01
CLP1Q08685 YIL068W-AYIL068W-A 384 nt2.51□□□□□ -2.01
CLP1Q08685 YKL066WYKL066W 444 nt2.51□□□□□ -2.01
CLP1Q08685 YMR187CYMR187C 1296 nt2.51□□□□□ -2.01
CLP1Q08685 DUG3YNL191W 1074 nt2.51□□□□□ -2.01
CLP1Q08685 SGT1YOR057W 1188 nt2.51□□□□□ -2.01
CLP1Q08685 YBR013CYBR013C 390 nt2.51□□□□□ -2.01
CLP1Q08685 IRC13YOR235W 315 nt2.51□□□□□ -2.01
CLP1Q08685 YBR085C-AYBR085C-A 258 nt2.51□□□□□ -2.01
CLP1Q08685 OSW7YFR039C 1533 nt2.51□□□□□ -2.01
CLP1Q08685 STE11YLR362W 2154 nt2.5□□□□□ -2.01
CLP1Q08685 YNR066CYNR066C 1311 nt2.5□□□□□ -2.01
CLP1Q08685 YIL080WYIL080W 4722 nt2.5□□□□□ -2.01
CLP1Q08685 ERG28YER044C 447 nt2.5□□□□□ -2.01
CLP1Q08685 SMX2YFL017W-A 234 nt2.5□□□□□ -2.01
CLP1Q08685 MST27YGL051W 705 nt2.5□□□□□ -2.01
CLP1Q08685 HTD2YHR067W 843 nt2.5□□□□□ -2.01
CLP1Q08685 YHR097CYHR097C 1101 nt2.5□□□□□ -2.01
CLP1Q08685 YIR023C-AYIR023C-A 324 nt2.5□□□□□ -2.01
CLP1Q08685 MCR1YKL150W 909 nt2.5□□□□□ -2.01
CLP1Q08685 BOS1YLR078C 735 nt2.5□□□□□ -2.01
CLP1Q08685 FYV6YNL133C 522 nt2.5□□□□□ -2.01
CLP1Q08685 YOL114CYOL114C 609 nt2.5□□□□□ -2.01
CLP1Q08685 UFE1YOR075W 1041 nt2.5□□□□□ -2.01
CLP1Q08685 MRPL27YBR282W 441 nt2.5□□□□□ -2.01
CLP1Q08685 URB2YJR041C 3525 nt2.5□□□□□ -2.01
CLP1Q08685 RGA1YOR127W 3024 nt2.49□□□□□ -2.01
CLP1Q08685 SNU23YDL098C 585 nt2.49□□□□□ -2.01
CLP1Q08685 RRP42YDL111C 798 nt2.49□□□□□ -2.01
CLP1Q08685 YGL006W-AYGL006W-A 111 nt2.49□□□□□ -2.01
CLP1Q08685 PFS1YHR185C 714 nt2.49□□□□□ -2.01
CLP1Q08685 PET191YJR034W 327 nt2.49□□□□□ -2.01
CLP1Q08685 POL32YJR043C 1053 nt2.49□□□□□ -2.01
CLP1Q08685 CCW14YLR390W-A 717 nt2.49□□□□□ -2.01
CLP1Q08685 KTI11YBL071W-A 249 nt2.49□□□□□ -2.01
CLP1Q08685 YNL319WYNL319W 441 nt2.49□□□□□ -2.01
CLP1Q08685 RTG3YBL103C 1461 nt2.49□□□□□ -2.01
CLP1Q08685 SIR4YDR227W 4077 nt2.49□□□□□ -2.01
CLP1Q08685 POM152YMR129W 4014 nt2.49□□□□□ -2.01
CLP1Q08685 PDR11YIL013C 4236 nt2.48□□□□□ -2.01
CLP1Q08685 YBR259WYBR259W 2067 nt2.48□□□□□ -2.01
CLP1Q08685 BNR1YIL159W 4128 nt2.48□□□□□ -2.01
CLP1Q08685 YDL157CYDL157C 357 nt2.48□□□□□ -2.01
CLP1Q08685 TIM9YEL020W-A 264 nt2.48□□□□□ -2.01
CLP1Q08685 MPS2YGL075C 1164 nt2.48□□□□□ -2.01
CLP1Q08685 YGR270C-AYGR270C-A 219 nt2.48□□□□□ -2.01
CLP1Q08685 CUP1-1YHR053C 186 nt2.48□□□□□ -2.01
CLP1Q08685 CUP1-2YHR055C 186 nt2.48□□□□□ -2.01
CLP1Q08685 YIR021W-AYIR021W-A 213 nt2.48□□□□□ -2.01
CLP1Q08685 YLR169WYLR169W 354 nt2.48□□□□□ -2.01
CLP1Q08685 END3YNL084C 1050 nt2.48□□□□□ -2.01
CLP1Q08685 SAC3YDR159W 3906 nt2.48□□□□□ -2.01
CLP1Q08685 SRO77YBL106C 3033 nt2.48□□□□□ -2.01
CLP1Q08685 SEC16YPL085W 6588 nt2.48□□□□□ -2.01
CLP1Q08685 YJR061WYJR061W 2808 nt2.48□□□□□ -2.01
CLP1Q08685 SCP160YJL080C 3669 nt2.48□□□□□ -2.01
CLP1Q08685 KEL2YGR238C 2649 nt2.47□□□□□ -2.01
CLP1Q08685 TSC13YDL015C 933 nt2.47□□□□□ -2.01
CLP1Q08685 TIM11YDR322C-A 291 nt2.47□□□□□ -2.01
CLP1Q08685 PEA2YER149C 1263 nt2.47□□□□□ -2.01
CLP1Q08685 UBC12YLR306W 567 nt2.47□□□□□ -2.01
CLP1Q08685 CCL1YPR025C 1182 nt2.47□□□□□ -2.01
CLP1Q08685 APA1YCL050C 966 nt2.47□□□□□ -2.01
CLP1Q08685 MAK11YKL021C 1407 nt2.47□□□□□ -2.01
CLP1Q08685 RGL1YPL066W 1440 nt2.47□□□□□ -2.01
CLP1Q08685 YNL018CYNL018C 1839 nt2.47□□□□□ -2.01
CLP1Q08685 YBL005W-BYBL005W-B 5268 nt2.47□□□□□ -2.01
CLP1Q08685 AFI1YOR129C 2682 nt2.46□□□□□ -2.01
CLP1Q08685 MRD1YPR112C 2664 nt2.46□□□□□ -2.01
CLP1Q08685 MON1YGL124C 1935 nt2.46□□□□□ -2.02
CLP1Q08685 SLS1YLR139C 1932 nt2.46□□□□□ -2.02
CLP1Q08685 TOF1YNL273W 3717 nt2.46□□□□□ -2.02
CLP1Q08685 NOP19YGR251W 591 nt2.46□□□□□ -2.02
CLP1Q08685 VPS25YJR102C 609 nt2.46□□□□□ -2.02
CLP1Q08685 YAL037WYAL037W 804 nt2.46□□□□□ -2.02
CLP1Q08685 CMC1YKL137W 336 nt2.46□□□□□ -2.02
CLP1Q08685 YKL165C-AYKL165C-A 234 nt2.46□□□□□ -2.02
CLP1Q08685 UTP30YKR060W 825 nt2.46□□□□□ -2.02
CLP1Q08685 YAL064WYAL064W 285 nt2.46□□□□□ -2.02
CLP1Q08685 CRS5YOR031W 210 nt2.46□□□□□ -2.02
CLP1Q08685 snR44snR44 211 nt2.46□□□□□ -2.02
CLP1Q08685 KSP1YHR082C 3090 nt2.46□□□□□ -2.02
CLP1Q08685 RPS25AYGR027C 327 nt2.45□□□□□ -2.02
CLP1Q08685 MET14YKL001C 609 nt2.45□□□□□ -2.02
CLP1Q08685 YKR070WYKR070W 1059 nt2.45□□□□□ -2.02
CLP1Q08685 YLR366WYLR366W 306 nt2.45□□□□□ -2.02
CLP1Q08685 YDR061WYDR061W 1620 nt2.45□□□□□ -2.02
CLP1Q08685 STN1YDR082W 1485 nt2.45□□□□□ -2.02
CLP1Q08685 SST2YLR452C 2097 nt2.45□□□□□ -2.02
CLP1Q08685 ART10YLR392C 1557 nt2.44□□□□□ -2.02
CLP1Q08685 YCR100CYCR100C 951 nt2.44□□□□□ -2.02
CLP1Q08685 YDR320W-BYDR320W-B 138 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 38.5 ms