Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 PEX6YNL329C 3093 nt3.92□□□□□ -1.78
SSL1Q04673 KIC1YHR102W 3243 nt3.92□□□□□ -1.78
SSL1Q04673 YNR065CYNR065C 3351 nt3.92□□□□□ -1.78
SSL1Q04673 SRD1YCR018C 666 nt3.92□□□□□ -1.78
SSL1Q04673 VFA1YER128W 612 nt3.92□□□□□ -1.78
SSL1Q04673 PET54YGR222W 882 nt3.92□□□□□ -1.78
SSL1Q04673 ERG2YMR202W 669 nt3.92□□□□□ -1.78
SSL1Q04673 YNL184CYNL184C 327 nt3.92□□□□□ -1.78
SSL1Q04673 SFM1YOR021C 642 nt3.92□□□□□ -1.78
SSL1Q04673 MRPL40YPL173W 894 nt3.92□□□□□ -1.78
SSL1Q04673 YBR062CYBR062C 543 nt3.92□□□□□ -1.78
SSL1Q04673 SCY1YGL083W 2415 nt3.92□□□□□ -1.78
SSL1Q04673 MIS1YBR084W 2928 nt3.91□□□□□ -1.78
SSL1Q04673 IRC3YDR332W 2070 nt3.91□□□□□ -1.78
SSL1Q04673 EBS1YDR206W 2655 nt3.91□□□□□ -1.78
SSL1Q04673 RPS13YDR064W 456 nt3.91□□□□□ -1.78
SSL1Q04673 YDR250CYDR250C 276 nt3.91□□□□□ -1.78
SSL1Q04673 BET3YKR068C 582 nt3.91□□□□□ -1.78
SSL1Q04673 COQ5YML110C 924 nt3.91□□□□□ -1.78
SSL1Q04673 ASC1YMR116C 960 nt3.91□□□□□ -1.78
SSL1Q04673 YNL089CYNL089C 477 nt3.91□□□□□ -1.78
SSL1Q04673 MPD2YOL088C 834 nt3.91□□□□□ -1.78
SSL1Q04673 RPL18AYOL120C 561 nt3.91□□□□□ -1.78
SSL1Q04673 IMH1YLR309C 2736 nt3.91□□□□□ -1.78
SSL1Q04673 NAT1YDL040C 2565 nt3.91□□□□□ -1.78
SSL1Q04673 NHX1YDR456W 1902 nt3.9□□□□□ -1.78
SSL1Q04673 BI4Q0120 1917 nt3.9□□□□□ -1.78
SSL1Q04673 RTR2YDR066C 591 nt3.9□□□□□ -1.79
SSL1Q04673 IRC2YDR112W 309 nt3.9□□□□□ -1.79
SSL1Q04673 CGR1YGL029W 363 nt3.9□□□□□ -1.79
SSL1Q04673 YGR121W-AYGR121W-A 216 nt3.9□□□□□ -1.79
SSL1Q04673 YHR032C-AYHR032C-A 120 nt3.9□□□□□ -1.79
SSL1Q04673 YLR076CYLR076C 423 nt3.9□□□□□ -1.79
SSL1Q04673 YMR013C-AYMR013C-A 150 nt3.9□□□□□ -1.79
SSL1Q04673 RPL16BYNL069C 597 nt3.9□□□□□ -1.79
SSL1Q04673 SWM2YNR004W 441 nt3.9□□□□□ -1.79
SSL1Q04673 DDP1YOR163W 567 nt3.9□□□□□ -1.79
SSL1Q04673 SSH1YBR283C 1473 nt3.9□□□□□ -1.79
SSL1Q04673 RIM13YMR154C 2184 nt3.9□□□□□ -1.79
SSL1Q04673 BIK1YCL029C 1323 nt3.9□□□□□ -1.79
SSL1Q04673 YPK9YOR291W 4419 nt3.9□□□□□ -1.79
SSL1Q04673 YJL132WYJL132W 2253 nt3.9□□□□□ -1.79
SSL1Q04673 PGS1YCL004W 1566 nt3.89□□□□□ -1.79
SSL1Q04673 CHL1YPL008W 2586 nt3.89□□□□□ -1.79
SSL1Q04673 PDR12YPL058C 4536 nt3.89□□□□□ -1.79
SSL1Q04673 SNF2YOR290C 5112 nt3.89□□□□□ -1.79
SSL1Q04673 YDL240C-AYDL240C-A 138 nt3.89□□□□□ -1.79
SSL1Q04673 AHA1YDR214W 1053 nt3.89□□□□□ -1.79
SSL1Q04673 RPL27BYDR471W 411 nt3.89□□□□□ -1.79
SSL1Q04673 RPL11BYGR085C 525 nt3.89□□□□□ -1.79
SSL1Q04673 YHL026CYHL026C 948 nt3.89□□□□□ -1.79
SSL1Q04673 YKL136WYKL136W 399 nt3.89□□□□□ -1.79
SSL1Q04673 NOP15YNL110C 663 nt3.89□□□□□ -1.79
SSL1Q04673 SRL1YOR247W 633 nt3.89□□□□□ -1.79
SSL1Q04673 RPL11AYPR102C 525 nt3.89□□□□□ -1.79
SSL1Q04673 SSF2YDR312W 1362 nt3.89□□□□□ -1.79
SSL1Q04673 YPR003CYPR003C 2265 nt3.88□□□□□ -1.79
SSL1Q04673 PRM15YMR278W 1869 nt3.88□□□□□ -1.79
SSL1Q04673 RPS18AYDR450W 441 nt3.88□□□□□ -1.79
SSL1Q04673 YEL075CYEL075C 369 nt3.88□□□□□ -1.79
SSL1Q04673 LIF1YGL090W 1266 nt3.88□□□□□ -1.79
SSL1Q04673 YBL028CYBL028C 321 nt3.88□□□□□ -1.79
SSL1Q04673 snR35snR35 204 nt3.88□□□□□ -1.79
SSL1Q04673 YLR177WYLR177W 1887 nt3.88□□□□□ -1.79
SSL1Q04673 YRR1YOR162C 2433 nt3.87□□□□□ -1.79
SSL1Q04673 VIP1YLR410W 3441 nt3.87□□□□□ -1.79
SSL1Q04673 PPZ1YML016C 2079 nt3.87□□□□□ -1.79
SSL1Q04673 YHR212CYHR212C 336 nt3.87□□□□□ -1.79
SSL1Q04673 SPC1YJR010C-A 285 nt3.87□□□□□ -1.79
SSL1Q04673 YKL068W-AYKL068W-A 237 nt3.87□□□□□ -1.79
SSL1Q04673 YAR060CYAR060C 336 nt3.87□□□□□ -1.79
SSL1Q04673 YMR304C-AYMR304C-A 351 nt3.87□□□□□ -1.79
SSL1Q04673 YBR051WYBR051W 351 nt3.87□□□□□ -1.79
SSL1Q04673 RPO21YDL140C 5202 nt3.87□□□□□ -1.79
SSL1Q04673 HRD1YOL013C 1656 nt3.87□□□□□ -1.79
SSL1Q04673 PPQ1YPL179W 1650 nt3.87□□□□□ -1.79
SSL1Q04673 GRS2YPR081C 1857 nt3.86□□□□□ -1.79
SSL1Q04673 DSF2YBR007C 2211 nt3.86□□□□□ -1.79
SSL1Q04673 SRP72YPL210C 1923 nt3.86□□□□□ -1.79
SSL1Q04673 TRK1YJL129C 3708 nt3.86□□□□□ -1.79
SSL1Q04673 CDC50YCR094W 1176 nt3.86□□□□□ -1.79
SSL1Q04673 tC(GCA)BtC(GCA)B 72 nt3.86□□□□□ -1.79
SSL1Q04673 tC(GCA)GtC(GCA)G 72 nt3.86□□□□□ -1.79
SSL1Q04673 tC(GCA)P1tC(GCA)P1 72 nt3.86□□□□□ -1.79
SSL1Q04673 tC(GCA)P2tC(GCA)P2 72 nt3.86□□□□□ -1.79
SSL1Q04673 FMP10YER182W 735 nt3.86□□□□□ -1.79
SSL1Q04673 RPB3YIL021W 957 nt3.86□□□□□ -1.79
SSL1Q04673 HIS5YIL116W 1158 nt3.86□□□□□ -1.79
SSL1Q04673 BSC3YLR465C 309 nt3.86□□□□□ -1.79
SSL1Q04673 YPL197CYPL197C 414 nt3.86□□□□□ -1.79
SSL1Q04673 EAP1YKL204W 1899 nt3.86□□□□□ -1.79
SSL1Q04673 CWH43YCR017C 2862 nt3.85□□□□□ -1.79
SSL1Q04673 NUP85YJR042W 2235 nt3.85□□□□□ -1.79
SSL1Q04673 RPS29BYDL061C 171 nt3.85□□□□□ -1.79
SSL1Q04673 OPI6YDL096C 327 nt3.85□□□□□ -1.79
SSL1Q04673 SOD1YJR104C 465 nt3.85□□□□□ -1.79
SSL1Q04673 MRPL38YKL170W 417 nt3.85□□□□□ -1.79
SSL1Q04673 INN1YNL152W 1230 nt3.85□□□□□ -1.79
SSL1Q04673 YOL134CYOL134C 390 nt3.85□□□□□ -1.79
SSL1Q04673 AIP1YMR092C 1848 nt3.85□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms