Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.75■□□□□ 0.27
CX3CL1P78423 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CX3CL1P78423 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.75■□□□□ 0.27
CX3CL1P78423 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CX3CL1P78423 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CX3CL1P78423 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 AC097381.1-201ENST00000429019 1296 ntBASIC16.74■□□□□ 0.27
CX3CL1P78423 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.74■□□□□ 0.27
CX3CL1P78423 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.74■□□□□ 0.27
CX3CL1P78423 AC053503.5-201ENST00000601508 636 ntBASIC16.74■□□□□ 0.27
CX3CL1P78423 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.74■□□□□ 0.27
CX3CL1P78423 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.74■□□□□ 0.27
CX3CL1P78423 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CX3CL1P78423 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CX3CL1P78423 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CX3CL1P78423 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.73■□□□□ 0.27
CX3CL1P78423 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.73■□□□□ 0.27
CX3CL1P78423 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.73■□□□□ 0.27
CX3CL1P78423 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.73■□□□□ 0.27
CX3CL1P78423 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CL1P78423 EEF1DP3-203ENST00000566025 782 ntBASIC16.73■□□□□ 0.27
CX3CL1P78423 MIR6821-201ENST00000617625 74 ntBASIC16.73■□□□□ 0.27
CX3CL1P78423 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.73■□□□□ 0.27
CX3CL1P78423 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CX3CL1P78423 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.73■□□□□ 0.27
CX3CL1P78423 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.73■□□□□ 0.27
CX3CL1P78423 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CX3CL1P78423 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.72■□□□□ 0.27
CX3CL1P78423 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.72■□□□□ 0.27
CX3CL1P78423 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.72■□□□□ 0.27
CX3CL1P78423 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.72■□□□□ 0.27
CX3CL1P78423 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.72■□□□□ 0.27
CX3CL1P78423 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.72■□□□□ 0.27
CX3CL1P78423 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.72■□□□□ 0.27
CX3CL1P78423 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.72■□□□□ 0.27
CX3CL1P78423 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CX3CL1P78423 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CX3CL1P78423 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CX3CL1P78423 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CX3CL1P78423 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CL1P78423 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.71■□□□□ 0.27
CX3CL1P78423 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
CX3CL1P78423 AC005229.4-201ENST00000610085 2198 ntBASIC16.71■□□□□ 0.27
CX3CL1P78423 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CL1P78423 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CL1P78423 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CX3CL1P78423 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CL1P78423 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.71■□□□□ 0.27
CX3CL1P78423 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.71■□□□□ 0.27
CX3CL1P78423 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.71■□□□□ 0.27
CX3CL1P78423 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.71■□□□□ 0.27
CX3CL1P78423 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CL1P78423 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.71■□□□□ 0.27
CX3CL1P78423 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CX3CL1P78423 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CX3CL1P78423 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CX3CL1P78423 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms