Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
CLDN6P56747 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN6P56747 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN6P56747 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN6P56747 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN6P56747 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.07■□□□□ 0.8
CLDN6P56747 AC091799.1-201ENST00000422823 811 ntBASIC20.07■□□□□ 0.8
CLDN6P56747 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN6P56747 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN6P56747 MIR4497-201ENST00000583208 89 ntBASIC20.07■□□□□ 0.8
CLDN6P56747 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN6P56747 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN6P56747 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLDN6P56747 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLDN6P56747 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN6P56747 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN6P56747 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN6P56747 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.06■□□□□ 0.8
CLDN6P56747 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN6P56747 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN6P56747 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CLDN6P56747 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN6P56747 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN6P56747 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN6P56747 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN6P56747 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN6P56747 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN6P56747 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN6P56747 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN6P56747 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN6P56747 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN6P56747 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN6P56747 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN6P56747 PNMA6B-201ENST00000538162 1200 ntBASIC20.05■□□□□ 0.8
CLDN6P56747 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN6P56747 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN6P56747 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN6P56747 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN6P56747 HLA-B-256ENST00000639848 1089 ntBASIC20.05■□□□□ 0.8
CLDN6P56747 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN6P56747 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CLDN6P56747 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN6P56747 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN6P56747 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN6P56747 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN6P56747 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN6P56747 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN6P56747 AC068473.5-201ENST00000616428 2072 ntBASIC20.04■□□□□ 0.8
CLDN6P56747 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN6P56747 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN6P56747 MIR1224-201ENST00000408193 85 ntBASIC20.04■□□□□ 0.8
CLDN6P56747 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN6P56747 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLDN6P56747 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLDN6P56747 AC092368.3-202ENST00000574180 1591 ntBASIC20.04■□□□□ 0.8
CLDN6P56747 AC012676.1-201ENST00000574705 1949 ntBASIC20.04■□□□□ 0.8
CLDN6P56747 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN6P56747 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CLDN6P56747 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN6P56747 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN6P56747 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN6P56747 AC211429.1-201ENST00000415277 523 ntBASIC20.03■□□□□ 0.8
CLDN6P56747 AC073912.3-201ENST00000624414 853 ntBASIC20.03■□□□□ 0.8
CLDN6P56747 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN6P56747 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLDN6P56747 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLDN6P56747 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN6P56747 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN6P56747 AC026471.6-201ENST00000622954 1905 ntBASIC20.02■□□□□ 0.8
CLDN6P56747 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN6P56747 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN6P56747 MIR718-201ENST00000390190 70 ntBASIC20.02■□□□□ 0.8
CLDN6P56747 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLDN6P56747 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN6P56747 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN6P56747 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN6P56747 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN6P56747 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN6P56747 SOX15-203ENST00000570788 1093 ntBASIC20.02■□□□□ 0.8
CLDN6P56747 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN6P56747 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN6P56747 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN6P56747 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN6P56747 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms