Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 DDR48YMR173W 1293 nt4□□□□□ -1.77
HDA1P53973 YOR331CYOR331C 558 nt4□□□□□ -1.77
HDA1P53973 FRM2YCL026C-A 582 nt4□□□□□ -1.77
HDA1P53973 snR54snR54 86 nt4□□□□□ -1.77
HDA1P53973 MUD2YKL074C 1584 nt4□□□□□ -1.77
HDA1P53973 SHE4YOR035C 2370 nt3.99□□□□□ -1.77
HDA1P53973 GRS2YPR081C 1857 nt3.99□□□□□ -1.77
HDA1P53973 RPS13YDR064W 456 nt3.99□□□□□ -1.77
HDA1P53973 CGR1YGL029W 363 nt3.99□□□□□ -1.77
HDA1P53973 RTS3YGR161C 792 nt3.99□□□□□ -1.77
HDA1P53973 YIL141WYIL141W 390 nt3.99□□□□□ -1.77
HDA1P53973 TMA19YKL056C 504 nt3.99□□□□□ -1.77
HDA1P53973 MCR1YKL150W 909 nt3.99□□□□□ -1.77
HDA1P53973 AIM29YKR074W 468 nt3.99□□□□□ -1.77
HDA1P53973 TDA8YAL064C-A 381 nt3.99□□□□□ -1.77
HDA1P53973 DAD2YKR083C 402 nt3.99□□□□□ -1.77
HDA1P53973 RNP1YLL046C 750 nt3.99□□□□□ -1.77
HDA1P53973 RAD33YML011C 534 nt3.99□□□□□ -1.77
HDA1P53973 RIM9YMR063W 720 nt3.99□□□□□ -1.77
HDA1P53973 RIO2YNL207W 1278 nt3.99□□□□□ -1.77
HDA1P53973 GPX2YBR244W 489 nt3.99□□□□□ -1.77
HDA1P53973 RAD54YGL163C 2697 nt3.99□□□□□ -1.77
HDA1P53973 SHS1YDL225W 1656 nt3.99□□□□□ -1.77
HDA1P53973 NCS2YNL119W 1482 nt3.98□□□□□ -1.77
HDA1P53973 VPS45YGL095C 1734 nt3.98□□□□□ -1.77
HDA1P53973 HAA1YPR008W 2085 nt3.98□□□□□ -1.77
HDA1P53973 RRI2YOL117W 1938 nt3.98□□□□□ -1.77
HDA1P53973 YER006C-AYER006C-A 318 nt3.98□□□□□ -1.77
HDA1P53973 YLR101CYLR101C 396 nt3.98□□□□□ -1.77
HDA1P53973 RPL6BYLR448W 531 nt3.98□□□□□ -1.77
HDA1P53973 EBS1YDR206W 2655 nt3.98□□□□□ -1.77
HDA1P53973 PRM15YMR278W 1869 nt3.98□□□□□ -1.77
HDA1P53973 APC5YOR249C 2058 nt3.98□□□□□ -1.77
HDA1P53973 ALA1YOR335C 2877 nt3.97□□□□□ -1.77
HDA1P53973 PIN4YBL051C 2007 nt3.97□□□□□ -1.77
HDA1P53973 MNL1YHR204W 2391 nt3.97□□□□□ -1.77
HDA1P53973 ATG31YDR022C 591 nt3.97□□□□□ -1.77
HDA1P53973 YDR537CYDR537C 606 nt3.97□□□□□ -1.77
HDA1P53973 YAL068W-AYAL068W-A 255 nt3.97□□□□□ -1.77
HDA1P53973 ARG80YMR042W 534 nt3.97□□□□□ -1.77
HDA1P53973 TIF11YMR260C 462 nt3.97□□□□□ -1.77
HDA1P53973 DDP1YOR163W 567 nt3.97□□□□□ -1.77
HDA1P53973 YPR096CYPR096C 303 nt3.97□□□□□ -1.77
HDA1P53973 IRC3YDR332W 2070 nt3.97□□□□□ -1.77
HDA1P53973 BUD5YCR038C 1929 nt3.97□□□□□ -1.77
HDA1P53973 KAR9YPL269W 1935 nt3.97□□□□□ -1.77
HDA1P53973 PAM1YDR251W 2493 nt3.97□□□□□ -1.77
HDA1P53973 BIG1YHR101C 1008 nt3.96□□□□□ -1.78
HDA1P53973 SEC22YLR268W 645 nt3.96□□□□□ -1.78
HDA1P53973 YLR287CYLR287C 1068 nt3.96□□□□□ -1.78
HDA1P53973 YML108WYML108W 318 nt3.96□□□□□ -1.78
HDA1P53973 NGL1YOL042W 1092 nt3.96□□□□□ -1.78
HDA1P53973 YOR053WYOR053W 342 nt3.96□□□□□ -1.78
HDA1P53973 YSY6YBR162W-A 198 nt3.96□□□□□ -1.78
HDA1P53973 RAD2YGR258C 3096 nt3.96□□□□□ -1.78
HDA1P53973 FMP25YLR077W 1752 nt3.95□□□□□ -1.78
HDA1P53973 SRD1YCR018C 666 nt3.95□□□□□ -1.78
HDA1P53973 RPS29BYDL061C 171 nt3.95□□□□□ -1.78
HDA1P53973 YGR017WYGR017W 894 nt3.95□□□□□ -1.78
HDA1P53973 YHR125WYHR125W 306 nt3.95□□□□□ -1.78
HDA1P53973 YLR428CYLR428C 345 nt3.95□□□□□ -1.78
HDA1P53973 YML099W-AYML099W-A 330 nt3.95□□□□□ -1.78
HDA1P53973 ERG2YMR202W 669 nt3.95□□□□□ -1.78
HDA1P53973 YNL184CYNL184C 327 nt3.95□□□□□ -1.78
HDA1P53973 ATX1YNL259C 222 nt3.95□□□□□ -1.78
HDA1P53973 SRL1YOR247W 633 nt3.95□□□□□ -1.78
HDA1P53973 snR35snR35 204 nt3.95□□□□□ -1.78
HDA1P53973 BRE5YNR051C 1548 nt3.95□□□□□ -1.78
HDA1P53973 TAF7YMR227C 1773 nt3.94□□□□□ -1.78
HDA1P53973 NUP85YJR042W 2235 nt3.94□□□□□ -1.78
HDA1P53973 RNR1YER070W 2667 nt3.94□□□□□ -1.78
HDA1P53973 YER135CYER135C 393 nt3.94□□□□□ -1.78
HDA1P53973 MIC19YFR011C 513 nt3.94□□□□□ -1.78
HDA1P53973 YHL026CYHL026C 948 nt3.94□□□□□ -1.78
HDA1P53973 YJL086CYJL086C 369 nt3.94□□□□□ -1.78
HDA1P53973 YBL028CYBL028C 321 nt3.94□□□□□ -1.78
HDA1P53973 YNL089CYNL089C 477 nt3.94□□□□□ -1.78
HDA1P53973 YOL159C-AYOL159C-A 273 nt3.94□□□□□ -1.78
HDA1P53973 SPT23YKL020C 3249 nt3.94□□□□□ -1.78
HDA1P53973 RSC1YGR056W 2787 nt3.94□□□□□ -1.78
HDA1P53973 SSM4YIL030C 3960 nt3.94□□□□□ -1.78
HDA1P53973 YEL075CYEL075C 369 nt3.93□□□□□ -1.78
HDA1P53973 SPT2YER161C 1002 nt3.93□□□□□ -1.78
HDA1P53973 ECM4YKR076W 1113 nt3.93□□□□□ -1.78
HDA1P53973 IMP4YNL075W 873 nt3.93□□□□□ -1.78
HDA1P53973 YOR199WYOR199W 330 nt3.93□□□□□ -1.78
HDA1P53973 MSS18YPR134W 807 nt3.93□□□□□ -1.78
HDA1P53973 YPR197CYPR197C 564 nt3.93□□□□□ -1.78
HDA1P53973 YBR209WYBR209W 318 nt3.93□□□□□ -1.78
HDA1P53973 STI1YOR027W 1770 nt3.93□□□□□ -1.78
HDA1P53973 LCB5YLR260W 2064 nt3.93□□□□□ -1.78
HDA1P53973 PES4YFR023W 1836 nt3.93□□□□□ -1.78
HDA1P53973 CDC55YGL190C 1581 nt3.93□□□□□ -1.78
HDA1P53973 TAF1YGR274C 3201 nt3.93□□□□□ -1.78
HDA1P53973 SSF1YHR066W 1362 nt3.92□□□□□ -1.78
HDA1P53973 SCY1YGL083W 2415 nt3.92□□□□□ -1.78
HDA1P53973 OSH3YHR073W 2991 nt3.92□□□□□ -1.78
HDA1P53973 SWF1YDR126W 1011 nt3.92□□□□□ -1.78
HDA1P53973 RPS18AYDR450W 441 nt3.92□□□□□ -1.78
HDA1P53973 YGL015CYGL015C 393 nt3.92□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 32.6 ms