Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIMK2P53671 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.02■□□□□ 0.95
LIMK2P53671 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LIMK2P53671 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LIMK2P53671 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LIMK2P53671 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LIMK2P53671 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.01■□□□□ 0.95
LIMK2P53671 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.01■□□□□ 0.95
LIMK2P53671 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.01■□□□□ 0.95
LIMK2P53671 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.01■□□□□ 0.95
LIMK2P53671 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.01■□□□□ 0.95
LIMK2P53671 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.01■□□□□ 0.95
LIMK2P53671 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIMK2P53671 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21■□□□□ 0.95
LIMK2P53671 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21■□□□□ 0.95
LIMK2P53671 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21■□□□□ 0.95
LIMK2P53671 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21■□□□□ 0.95
LIMK2P53671 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 AC073130.3-201ENST00000624389 2278 ntBASIC21■□□□□ 0.95
LIMK2P53671 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21■□□□□ 0.95
LIMK2P53671 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21■□□□□ 0.95
LIMK2P53671 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21■□□□□ 0.95
LIMK2P53671 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIMK2P53671 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21■□□□□ 0.95
LIMK2P53671 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LIMK2P53671 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.99■□□□□ 0.95
LIMK2P53671 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIMK2P53671 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.99■□□□□ 0.95
LIMK2P53671 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.99■□□□□ 0.95
LIMK2P53671 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.99■□□□□ 0.95
LIMK2P53671 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.99■□□□□ 0.95
LIMK2P53671 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.99■□□□□ 0.95
LIMK2P53671 LINC01521-201ENST00000504184 1943 ntBASIC20.99■□□□□ 0.95
LIMK2P53671 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIMK2P53671 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.99■□□□□ 0.95
LIMK2P53671 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LIMK2P53671 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIMK2P53671 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.99■□□□□ 0.95
LIMK2P53671 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LIMK2P53671 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.98■□□□□ 0.95
LIMK2P53671 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.98■□□□□ 0.95
LIMK2P53671 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LIMK2P53671 AC009237.3-201ENST00000393279 1427 ntBASIC20.98■□□□□ 0.95
LIMK2P53671 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LIMK2P53671 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LIMK2P53671 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.98■□□□□ 0.95
LIMK2P53671 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.98■□□□□ 0.95
LIMK2P53671 KRT18P61-201ENST00000585825 1298 ntBASIC20.98■□□□□ 0.95
LIMK2P53671 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
LIMK2P53671 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
LIMK2P53671 AC055733.4-201ENST00000638462 1354 ntBASIC20.97■□□□□ 0.95
LIMK2P53671 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LIMK2P53671 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.97■□□□□ 0.95
LIMK2P53671 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LIMK2P53671 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LIMK2P53671 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LIMK2P53671 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
LIMK2P53671 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LIMK2P53671 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIMK2P53671 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIMK2P53671 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIMK2P53671 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LIMK2P53671 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIMK2P53671 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIMK2P53671 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.96■□□□□ 0.95
LIMK2P53671 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 AP004607.4-201ENST00000530158 1459 ntBASIC20.95■□□□□ 0.94
LIMK2P53671 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.95■□□□□ 0.94
LIMK2P53671 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.95■□□□□ 0.94
LIMK2P53671 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.95■□□□□ 0.94
LIMK2P53671 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.95■□□□□ 0.94
LIMK2P53671 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms