Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GTF2A1P52655 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
GTF2A1P52655 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
GTF2A1P52655 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.4■□□□□ 0.86
GTF2A1P52655 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GTF2A1P52655 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
GTF2A1P52655 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
GTF2A1P52655 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
GTF2A1P52655 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.39■□□□□ 0.86
GTF2A1P52655 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.39■□□□□ 0.86
GTF2A1P52655 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GTF2A1P52655 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
GTF2A1P52655 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.39■□□□□ 0.85
GTF2A1P52655 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.39■□□□□ 0.85
GTF2A1P52655 AC011270.2-201ENST00000624293 2550 ntBASIC20.39■□□□□ 0.85
GTF2A1P52655 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 ECEL1P2-201ENST00000461596 1295 ntBASIC20.39■□□□□ 0.85
GTF2A1P52655 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.39■□□□□ 0.85
GTF2A1P52655 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GTF2A1P52655 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GTF2A1P52655 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GTF2A1P52655 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
GTF2A1P52655 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GTF2A1P52655 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.38■□□□□ 0.85
GTF2A1P52655 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF2A1P52655 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GTF2A1P52655 AL161729.1-201ENST00000604104 1402 ntBASIC20.38■□□□□ 0.85
GTF2A1P52655 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.38■□□□□ 0.85
GTF2A1P52655 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.38■□□□□ 0.85
GTF2A1P52655 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.38■□□□□ 0.85
GTF2A1P52655 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.38■□□□□ 0.85
GTF2A1P52655 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A1P52655 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A1P52655 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A1P52655 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GTF2A1P52655 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GTF2A1P52655 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
GTF2A1P52655 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.37■□□□□ 0.85
GTF2A1P52655 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 AL139384.1-201ENST00000612143 3047 ntBASIC20.37■□□□□ 0.85
GTF2A1P52655 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.37■□□□□ 0.85
GTF2A1P52655 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GTF2A1P52655 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GTF2A1P52655 AC012313.1-201ENST00000593393 3059 ntBASIC20.37■□□□□ 0.85
GTF2A1P52655 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.36■□□□□ 0.85
GTF2A1P52655 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
GTF2A1P52655 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
GTF2A1P52655 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.36■□□□□ 0.85
GTF2A1P52655 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.36■□□□□ 0.85
GTF2A1P52655 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GTF2A1P52655 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
GTF2A1P52655 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GTF2A1P52655 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms