Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCNKAP51800 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCNKAP51800 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.47■□□□□ 0.87
CLCNKAP51800 GPX1P1-201ENST00000388829 606 ntBASIC20.47■□□□□ 0.87
CLCNKAP51800 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.47■□□□□ 0.87
CLCNKAP51800 HLA-L-209ENST00000420110 1011 ntBASIC20.47■□□□□ 0.87
CLCNKAP51800 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.47■□□□□ 0.87
CLCNKAP51800 AC244015.2-201ENST00000616358 1861 ntBASIC20.47■□□□□ 0.87
CLCNKAP51800 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCNKAP51800 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CLCNKAP51800 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCNKAP51800 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.47■□□□□ 0.87
CLCNKAP51800 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLCNKAP51800 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.46■□□□□ 0.87
CLCNKAP51800 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CLCNKAP51800 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.46■□□□□ 0.87
CLCNKAP51800 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CLCNKAP51800 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLCNKAP51800 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLCNKAP51800 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CLCNKAP51800 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.45■□□□□ 0.86
CLCNKAP51800 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.45■□□□□ 0.86
CLCNKAP51800 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.45■□□□□ 0.86
CLCNKAP51800 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLCNKAP51800 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLCNKAP51800 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CLCNKAP51800 LINC00565-201ENST00000562710 2331 ntBASIC20.44■□□□□ 0.86
CLCNKAP51800 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCNKAP51800 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CLCNKAP51800 AC245052.3-201ENST00000450182 901 ntBASIC20.44■□□□□ 0.86
CLCNKAP51800 AC083906.2-201ENST00000511578 360 ntBASIC20.44■□□□□ 0.86
CLCNKAP51800 AC104771.1-201ENST00000603335 964 ntBASIC20.44■□□□□ 0.86
CLCNKAP51800 AL591742.1-201ENST00000604433 565 ntBASIC20.44■□□□□ 0.86
CLCNKAP51800 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.44■□□□□ 0.86
CLCNKAP51800 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLCNKAP51800 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
CLCNKAP51800 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CLCNKAP51800 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLCNKAP51800 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.43■□□□□ 0.86
CLCNKAP51800 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.43■□□□□ 0.86
CLCNKAP51800 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CLCNKAP51800 AL109923.1-201ENST00000618799 583 ntBASIC20.43■□□□□ 0.86
CLCNKAP51800 OR10C1-204ENST00000622521 1039 ntBASIC20.43■□□□□ 0.86
CLCNKAP51800 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.43■□□□□ 0.86
CLCNKAP51800 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.43■□□□□ 0.86
CLCNKAP51800 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLCNKAP51800 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.42■□□□□ 0.86
CLCNKAP51800 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLCNKAP51800 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLCNKAP51800 CYP2T1P-201ENST00000432607 1285 ntBASIC20.42■□□□□ 0.86
CLCNKAP51800 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CLCNKAP51800 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CLCNKAP51800 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLCNKAP51800 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms