Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.66■■□□□ 1.38
USP11P51784 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP11P51784 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
USP11P51784 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
USP11P51784 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.65■■□□□ 1.38
USP11P51784 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
USP11P51784 AC091799.1-201ENST00000422823 811 ntBASIC23.65■■□□□ 1.38
USP11P51784 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.65■■□□□ 1.38
USP11P51784 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.65■■□□□ 1.38
USP11P51784 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
USP11P51784 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP11P51784 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP11P51784 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP11P51784 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
USP11P51784 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
USP11P51784 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
USP11P51784 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.64■■□□□ 1.38
USP11P51784 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.64■■□□□ 1.38
USP11P51784 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
USP11P51784 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP11P51784 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP11P51784 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
USP11P51784 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.64■■□□□ 1.37
USP11P51784 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP11P51784 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
USP11P51784 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
USP11P51784 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.63■■□□□ 1.37
USP11P51784 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 AL162412.1-201ENST00000567129 965 ntBASIC23.63■■□□□ 1.37
USP11P51784 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
USP11P51784 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
USP11P51784 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
USP11P51784 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USP11P51784 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP11P51784 AL024507.2-201ENST00000606070 2574 ntBASIC23.62■■□□□ 1.37
USP11P51784 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.62■■□□□ 1.37
USP11P51784 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP11P51784 FEM1AP4-201ENST00000443167 1987 ntBASIC23.62■■□□□ 1.37
USP11P51784 AC068338.2-201ENST00000563278 1430 ntBASIC23.62■■□□□ 1.37
USP11P51784 AC026310.3-201ENST00000625186 2373 ntBASIC23.62■■□□□ 1.37
USP11P51784 AC090192.1-201ENST00000517740 490 ntBASIC23.62■■□□□ 1.37
USP11P51784 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.62■■□□□ 1.37
USP11P51784 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.62■■□□□ 1.37
USP11P51784 AL591742.1-201ENST00000604433 565 ntBASIC23.62■■□□□ 1.37
USP11P51784 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.62■■□□□ 1.37
USP11P51784 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.62■■□□□ 1.37
USP11P51784 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
USP11P51784 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP11P51784 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.62■■□□□ 1.37
USP11P51784 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USP11P51784 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.61■■□□□ 1.37
USP11P51784 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
USP11P51784 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.61■■□□□ 1.37
USP11P51784 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
USP11P51784 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.61■■□□□ 1.37
USP11P51784 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.61■■□□□ 1.37
USP11P51784 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
USP11P51784 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
USP11P51784 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.6■■□□□ 1.37
USP11P51784 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP11P51784 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP11P51784 CROCCP5-201ENST00000436658 830 ntBASIC23.6■■□□□ 1.37
USP11P51784 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.6■■□□□ 1.37
USP11P51784 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.6■■□□□ 1.37
USP11P51784 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.6■■□□□ 1.37
USP11P51784 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USP11P51784 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.6■■□□□ 1.37
USP11P51784 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
USP11P51784 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP11P51784 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
USP11P51784 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USP11P51784 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.59■■□□□ 1.37
USP11P51784 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USP11P51784 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USP11P51784 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
USP11P51784 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.59■■□□□ 1.37
USP11P51784 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USP11P51784 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.59■■□□□ 1.37
USP11P51784 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USP11P51784 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.59■■□□□ 1.37
USP11P51784 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
USP11P51784 AL049796.1-201ENST00000565336 1766 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms