Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
COL15A1P39059 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
COL15A1P39059 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.62■■□□□ 1.85
COL15A1P39059 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL15A1P39059 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.62■■□□□ 1.85
COL15A1P39059 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
COL15A1P39059 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL15A1P39059 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL15A1P39059 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.61■■□□□ 1.85
COL15A1P39059 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
COL15A1P39059 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
COL15A1P39059 AC245052.3-201ENST00000450182 901 ntBASIC26.61■■□□□ 1.85
COL15A1P39059 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.61■■□□□ 1.85
COL15A1P39059 AC133561.1-201ENST00000568600 2415 ntBASIC26.61■■□□□ 1.85
COL15A1P39059 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
COL15A1P39059 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
COL15A1P39059 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
COL15A1P39059 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
COL15A1P39059 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.6■■□□□ 1.85
COL15A1P39059 HLA-B-256ENST00000639848 1089 ntBASIC26.6■■□□□ 1.85
COL15A1P39059 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
COL15A1P39059 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.6■■□□□ 1.85
COL15A1P39059 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
COL15A1P39059 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
COL15A1P39059 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL15A1P39059 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.6■■□□□ 1.85
COL15A1P39059 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.59■■□□□ 1.85
COL15A1P39059 AL359736.2-201ENST00000621992 437 ntBASIC26.59■■□□□ 1.85
COL15A1P39059 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.59■■□□□ 1.85
COL15A1P39059 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.59■■□□□ 1.85
COL15A1P39059 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.59■■□□□ 1.85
COL15A1P39059 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.59■■□□□ 1.85
COL15A1P39059 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
COL15A1P39059 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL15A1P39059 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL15A1P39059 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.58■■□□□ 1.85
COL15A1P39059 AC008550.1-201ENST00000511500 884 ntBASIC26.58■■□□□ 1.85
COL15A1P39059 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL15A1P39059 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL15A1P39059 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL15A1P39059 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL15A1P39059 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL15A1P39059 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.58■■□□□ 1.85
COL15A1P39059 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL15A1P39059 GUSBP5-202ENST00000510805 1989 ntBASIC26.58■■□□□ 1.85
COL15A1P39059 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.58■■□□□ 1.85
COL15A1P39059 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
COL15A1P39059 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
COL15A1P39059 CDV3P1-201ENST00000471403 739 ntBASIC26.58■■□□□ 1.84
COL15A1P39059 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.57■■□□□ 1.84
COL15A1P39059 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
COL15A1P39059 ECEL1P1-201ENST00000373592 1742 ntBASIC26.57■■□□□ 1.84
COL15A1P39059 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL15A1P39059 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.57■■□□□ 1.84
COL15A1P39059 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL15A1P39059 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.57■■□□□ 1.84
COL15A1P39059 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL15A1P39059 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
COL15A1P39059 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL15A1P39059 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL15A1P39059 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.56■■□□□ 1.84
COL15A1P39059 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.56■■□□□ 1.84
COL15A1P39059 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL15A1P39059 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL15A1P39059 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
COL15A1P39059 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
COL15A1P39059 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 AC012676.1-201ENST00000574705 1949 ntBASIC26.56■■□□□ 1.84
COL15A1P39059 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.56■■□□□ 1.84
COL15A1P39059 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL15A1P39059 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC26.55■■□□□ 1.84
COL15A1P39059 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL15A1P39059 AC233723.2-201ENST00000623798 2106 ntBASIC26.55■■□□□ 1.84
COL15A1P39059 FAM99A-202ENST00000538190 1989 ntBASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms