Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC1P35251 AC097381.1-201ENST00000429019 1296 ntBASIC21.95■■□□□ 1.1
RFC1P35251 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFC1P35251 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.95■■□□□ 1.1
RFC1P35251 KRT18P61-201ENST00000585825 1298 ntBASIC21.95■■□□□ 1.1
RFC1P35251 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RFC1P35251 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.95■■□□□ 1.1
RFC1P35251 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC1P35251 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC1P35251 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFC1P35251 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC1P35251 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC1P35251 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC1P35251 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.94■■□□□ 1.1
RFC1P35251 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC1P35251 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.94■■□□□ 1.1
RFC1P35251 MIR6821-201ENST00000617625 74 ntBASIC21.94■■□□□ 1.1
RFC1P35251 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RFC1P35251 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RFC1P35251 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC1P35251 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC1P35251 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.93■■□□□ 1.1
RFC1P35251 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
RFC1P35251 AC010141.2-201ENST00000452426 721 ntBASIC21.93■■□□□ 1.1
RFC1P35251 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC1P35251 AC008175.2-201ENST00000612840 297 ntBASIC21.93■■□□□ 1.1
RFC1P35251 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC1P35251 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC1P35251 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC1P35251 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC1P35251 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC1P35251 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.92■■□□□ 1.1
RFC1P35251 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 POU5F1P4-201ENST00000413175 1085 ntBASIC21.92■■□□□ 1.1
RFC1P35251 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.92■■□□□ 1.1
RFC1P35251 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC1P35251 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC1P35251 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.92■■□□□ 1.1
RFC1P35251 AC087623.3-201ENST00000607047 1098 ntBASIC21.92■■□□□ 1.1
RFC1P35251 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC1P35251 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC1P35251 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.92■■□□□ 1.1
RFC1P35251 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC1P35251 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.91■■□□□ 1.1
RFC1P35251 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.91■■□□□ 1.1
RFC1P35251 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC1P35251 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFC1P35251 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFC1P35251 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RFC1P35251 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFC1P35251 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.91■■□□□ 1.1
RFC1P35251 AP001160.3-201ENST00000601484 763 ntBASIC21.91■■□□□ 1.1
RFC1P35251 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC1P35251 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC1P35251 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.9■■□□□ 1.1
RFC1P35251 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC1P35251 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RFC1P35251 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.9■■□□□ 1.1
RFC1P35251 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFC1P35251 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC1P35251 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RFC1P35251 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC1P35251 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RFC1P35251 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.89■■□□□ 1.09
RFC1P35251 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RFC1P35251 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RFC1P35251 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms